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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJEB6584 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25523772 25523772 PRJEB6584f_S_NODE_1769_length_214_cov_2.206704_g1763_i0 PRJEB6584 1769 214 2.206704 4.72234656 Chlorellaceae 35461 Plants Plants 103 4.11e-25   NR KAK9818650.1 904363 g1763 i0 68.3 14.8317757009346 63 20 88.3 0 1 189 180 242 KAK9818650.1 hypothetical protein WJX74_008699 [Apatococcus lobatus] diamond 3174 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Apatococcus Apatococcus lobatus
25616264 25616264 PRJEB6584o_S_NODE_8105_length_301_cov_176.308271_g7997_i0 PRJEB6584 8105 301 176.308271 530.68789571 Chlamydomonadales 3042 Plants Plants 69.3 2.63e-12   NR GFR51299.1 47775 g7997 i0 55.6 2.9202657807309 63 25 59.8 1 294 115 45 107 GFR51299.1 hypothetical protein Agub_g13661 [Astrephomene gubernaculifera] diamond 879 69.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
26068835 26068835 PRJEB6584o_S_NODE_18837_length_207_cov_4.901163_g18729_i0 PRJEB6584 18837 207 4.901163 10.14540741 Eukaryota 2759 Plants Plants 101 1.19e-25   NR PRW57710.1 3076 g18729 i0 65.2 2.98550724637681 69 24 100 0 207 1 58 126 PRW57710.1 translation factor SUI1-like protein 2 [Chlorella sorokiniana] diamond 618 101 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
26432042 26432042 PRJEB6584f_S_NODE_871_length_260_cov_3.137778_g865_i0 PRJEB6584 871 260 3.137778 8.1582228 Helicosporidium sp. ATCC 5 1907511 Plants Plants 122 3.2100000000000004e-33   NR KDD76983.1 1291522 g865 i0 74.1 0.934615384615385 81 21 93.5 0 258 16 86 166 KDD76983.1 hypothetical protein H632_c48p1 [Helicosporidium sp. ATCC 50920] diamond 243 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
32929507 32929507 PRJEB6584o_S_NODE_2985_length_422_cov_8.925065_g2878_i0 PRJEB6584 2985 422 8.925065 37.6637743 Trebouxia sp. A1-2 2608996 Plants Plants 55.5 2.5e-7   NR KAA6429663.1 2608996 g2878 i0 56.1 0.40521327014218 57 25 40.5 0 201 371 1 57 KAA6429663.1 MAG: hypothetical protein FRX49_00097 [Trebouxia sp. A1-2] diamond 171 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
32963623 32963623 PRJEB6584o_S_NODE_13762_length_237_cov_20.391089_g13654_i0 PRJEB6584 13762 237 20.391089 48.32688093 Dunaliella salina 3046 Plants Plants 65.5 1.02e-11   NR KAF5829190.1 3046 g13654 i0 60 3.0506329113924 50 20 63.3 0 223 74 49 98 KAF5829190.1 component of cytosolic 80S ribosome and 40S small subunit [Dunaliella salina] diamond 723 65.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
32997606 32997606 PRJEB6584o_S_NODE_13131_length_243_cov_2.225962_g13023_i0 PRJEB6584 13131 243 2.225962 5.40908766 Leontynka pallida 2912034 Plants Plants 47 3.52e-4   NR YP_010388691.1 2912034 g13023 i0 41.4 1.27160493827161 58 34 71.6 0 53 226 31 88 YP_010388691.1 ribosomal protein S11 [Leontynka pallida] diamond 309 47 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Leontynka Leontynka pallida
32998064 32998064 PRJEB6584o_S_NODE_8395_length_297_cov_2.629771_g8287_i0 PRJEB6584 8395 297 2.629771 7.81041987 Micractinium conductrix 554055 Plants Plants 45.8 0.00344   NR PSC76047.1 554055 g8287 i0 33.3 1.41414141414141 81 53 80.8 1 1 240 101 181 PSC76047.1 ATP synthase subunit mitochondrial [Micractinium conductrix] diamond 420 45.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
33014713 33014713 PRJEB6584o_S_NODE_16268_length_220_cov_3.475676_g16160_i0 PRJEB6584 16268 220 3.475676 7.6464872 Volvox reticuliferus 1737510 Plants Plants 53.1 8.24e-7   NR GIL81802.1 1737510 g16160 i0 47.8 1.21363636363636 46 24 62.7 0 4 141 69 114 GIL81802.1 hypothetical protein Vretifemale_10800 [Volvox reticuliferus] diamond 267 53.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
33082720 33082720 PRJEB6584d_S_NODE_7262_length_222_cov_2.149733_g7194_i0 PRJEB6584 7262 222 2.149733 4.77240726 Helicosporidium sp. ATCC 5 1907511 Plants Plants 40.8 0.0443   NR KDD77150.1 1291522 g7194 i0 75 0.324324324324324 24 6 32.4 0 220 149 85 108 KDD77150.1 ribosomal protein L35Ae [Helicosporidium sp. ATCC 50920] diamond 72 40.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
33116806 33116806 PRJEB6584e_S_NODE_1927_length_205_cov_5.294118_g1912_i0 PRJEB6584 1927 205 5.294118 10.8529419 Boodleopsis sp. H. 2320802 Plants Plants 43.1 0.00835   NR YP_009518971.1 2320802 g1912 i0 44.4 3.71707317073171 45 25 65.9 0 38 172 29 73 YP_009518971.1 ribosomal protein S11 [Boodleopsis sp. H.0758] diamond 762 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Boodleopsis Boodleopsis sp. H.0758
33128000 33128000 PRJEB6584o_S_NODE_4551_length_371_cov_8.366071_g4443_i0 PRJEB6584 4551 371 8.366071 31.03812341 Chlorophyceae 3166 Plants Plants 90.1 3.92e-18   NR GBF96991.1 307507 g4443 i0 73.7 2.30458221024259 57 15 46.1 0 371 201 457 513 GBF96991.1 ATP synthase beta mitochondrial precursor [Raphidocelis subcapitata] diamond 855 90.5 0.995580110497237 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;