contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26340717 | 26340717 | PRJEB6584o_S_NODE_13439_length_240_cov_4.829268_g13331_i0 | PRJEB6584 | 13439 | 240 | 4.829268 | 11.5902432 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 120 | 4.1699999999999995e-30 | NR | MCE9619661.1 | 2026780 | g13331 | i0 | 65.8 | 2.9875 | 79 | 27 | 98.8 | 0 | 238 | 2 | 24 | 102 | MCE9619661.1 amidohydrolase family protein [Planctomycetota bacterium] | diamond | 717 | 121 | 0.991735537190083 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32928966 | 32928966 | PRJEB6584a_S_NODE_3097_length_214_cov_4.039106_g3077_i0 | PRJEB6584 | 3097 | 214 | 4.039106 | 8.64368684 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 67.4 | 5.31e-11 | NR | MFO0877588.1 | 2052164 | g3077 | i0 | 49.2 | 4.55607476635514 | 65 | 33 | 91.1 | 0 | 2 | 196 | 1164 | 1228 | MFO0877588.1 ATP-binding protein [Gemmataceae bacterium] | diamond | 975 | 67.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 32929019 | 32929019 | PRJEB6584a_S_NODE_7641_length_163_cov_1.703125_g7621_i0 | PRJEB6584 | 7641 | 163 | 1.703125 | 2.77609375 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 56.2 | 1.22e-7 | NR | MBC7979552.1 | 2562705 | g7621 | i0 | 60 | 0.828220858895706 | 45 | 18 | 82.8 | 0 | 27 | 161 | 130 | 174 | MBC7979552.1 acetyltransferase [Akkermansiaceae bacterium] | diamond | 135 | 56.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 32946837 | 32946837 | PRJEB6584o_S_NODE_77970_length_153_cov_2.525424_g77862_i0 | PRJEB6584 | 77970 | 153 | 2.525424 | 3.86389872 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 46.2 | 6.67e-4 | NR | HOY59968.1 | 2026799 | g77862 | i0 | 52.5 | 2.92156862745098 | 40 | 16 | 72.5 | 1 | 132 | 22 | 3 | 42 | HOY59968.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 447 | 46.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 33049006 | 33049006 | PRJEB6584o_S_NODE_46549_length_168_cov_2.067669_g46441_i0 | PRJEB6584 | 46549 | 168 | 2.067669 | 3.47368392 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.2 | 0.0472 | NR | MCE9636583.1 | 2026780 | g46441 | i0 | 39.5 | 0.767857142857143 | 43 | 21 | 69.6 | 2 | 3 | 119 | 164 | 205 | MCE9636583.1 glycosyltransferase family 39 protein [Planctomycetota bacterium] | diamond | 129 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 33110883 | 33110883 | PRJEB6584o_S_NODE_62478_length_161_cov_2.484127_g62370_i0 | PRJEB6584 | 62478 | 161 | 2.484127 | 3.99944447 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 76.6 | 1.24e-14 | NR | MCE9619661.1 | 2026780 | g62370 | i0 | 87.8 | 4.58385093167702 | 41 | 5 | 76.4 | 0 | 159 | 37 | 227 | 267 | MCE9619661.1 amidohydrolase family protein [Planctomycetota bacterium] | diamond | 738 | 76.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 33128026 | 33128026 | PRJEB6584o_S_NODE_8711_length_292_cov_4.914397_g8603_i0 | PRJEB6584 | 8711 | 292 | 4.914397 | 14.35003924 | Bacteria | 2 | Bacteria | Bacteria | 122 | 1.28e-30 | NR | MAC19092.1 | 2026778 | g8603 | i0 | 72.3 | 3.36986301369863 | 83 | 23 | 85.3 | 0 | 270 | 22 | 325 | 407 | MAC19092.1 cystathionine beta-lyase [Phycisphaerae bacterium] | diamond | 984 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 33134311 | 33134311 | PRJEB6584o_S_NODE_23671_length_192_cov_2.713376_g23563_i0 | PRJEB6584 | 23671 | 192 | 2.713376 | 5.20968192 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 50.8 | 2.44e-5 | NR | NOS70016.1 | 2026799 | g23563 | i0 | 58.3 | 0.5625 | 36 | 15 | 56.3 | 0 | 190 | 83 | 232 | 267 | NOS70016.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 108 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 33168260 | 33168260 | PRJEB6584o_S_NODE_19840_length_203_cov_2.309524_g19732_i0 | PRJEB6584 | 19840 | 203 | 2.309524 | 4.68833372 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 63.5 | 8.96e-10 | NR | MBI1369225.1 | 2026780 | g19732 | i0 | 42.4 | 0.975369458128079 | 66 | 38 | 97.5 | 0 | 6 | 203 | 43 | 108 | MBI1369225.1 IS630 family transposase [Planctomycetota bacterium] | diamond | 198 | 63.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 33179298 | 33179298 | PRJEB6584o_S_NODE_20280_length_201_cov_4803.108434_g20172_i0 | PRJEB6584 | 20280 | 201 | 4803.108434 | 9654.24795234 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 44.7 | 0.00426 | NR | MBI5779285.1 | 2026780 | g20172 | i0 | 54.8 | 1.26865671641791 | 42 | 18 | 62.7 | 1 | 29 | 154 | 192 | 232 | MBI5779285.1 FkbM family methyltransferase [Planctomycetota bacterium] | diamond | 255 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;