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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJEB6584 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25795595 25795595 PRJEB6584b_S_NODE_6491_length_172_cov_3.065693_g6473_i0 PRJEB6584 6491 172 3.065693 5.27299196 Patescibacteria group bacterium 2052139 Bacteria Bacteria 79.3 1.75e-15   NR TXG76615.1 2052139 g6473 i0 78.8 0.906976744186046 52 11 90.7 0 171 16 130 181 TXG76615.1 MAG: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase [Patescibacteria group bacterium] diamond 156 79.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26069514 26069514 PRJEB6584o_S_NODE_6365_length_330_cov_11.376271_g6257_i0 PRJEB6584 6365 330 11.376271 37.5416943 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 107 3.89e-27   NR MBT4936660.1 2030811 g6257 i0 62.8 0.709090909090909 78 29 70.9 0 305 72 71 148 MBT4936660.1 50S ribosomal protein L15 [Candidatus Peregrinibacteria bacterium] diamond 234 107 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
26160302 26160302 PRJEB6584e_S_NODE_877_length_269_cov_6.286325_g862_i0 PRJEB6584 877 269 6.286325 16.91021425 Bacteria 2 Bacteria Bacteria 79 1.14e-16   NR KKQ34433.1 1618742 g862 i0 70.4 3.9814126394052 54 16 60.2 0 267 106 34 87 KKQ34433.1 MAG: RNP-1 like protein RNA-binding protein [Candidatus Nomurabacteria bacterium GW2011_GWB1_37_5] diamond 1071 79.3 0.996216897856242 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWB1_37_5
32923077 32923077 PRJEB6584o_S_NODE_41273_length_171_cov_2.779412_g41165_i0 PRJEB6584 41273 171 2.779412 4.75279452 Pseudomonadati 3379134 Bacteria Bacteria 89 2.1200000000000003e-21   NR MDB5258941.1 2052153 g41165 i0 70.4 3.78947368421053 54 16 94.7 0 1 162 17 70 MDB5258941.1 mitomycin resistance protein [Candidatus Taylorbacteria bacterium] diamond 648 89 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
32981088 32981088 PRJEB6584o_S_NODE_7635_length_308_cov_18.384615_g7527_i0 PRJEB6584 7635 308 18.384615 56.6246142 Parcubacteria group bacterium 2026774 Bacteria Bacteria 58.2 2e-8   NR NMB92271.1 2026774 g7527 i0 42.9 2.72727272727273 70 39 68.2 1 307 98 5 73 NMB92271.1 RNA-binding protein [Parcubacteria group bacterium] diamond 840 58.2 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium
33014837 33014837 PRJEB6584o_S_NODE_26324_length_187_cov_2.434211_g26216_i0 PRJEB6584 26324 187 2.434211 4.55197457 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 48.5 1.65e-4   NR HXJ79892.1 2032687 g26216 i0 60.5 0.689839572192513 43 17 69 0 187 59 1080 1122 HXJ79892.1 response regulator [Candidatus Methylomirabilis sp.] diamond 129 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
33031860 33031860 PRJEB6584o_S_NODE_18492_length_209_cov_2.155172_g18384_i0 PRJEB6584 18492 209 2.155172 4.50430948 Candidatus Stahlbacteria bacterium 2528828 Bacteria Bacteria 47.8 4.01e-4   NR TEU00595.1 2528828 g18384 i0 55.9 0.947368421052632 34 15 48.8 0 198 97 404 437 TEU00595.1 MAG: saccharopine dehydrogenase [Candidatus Stahlbacteria bacterium] diamond 198 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Stahliibacteriota         Candidatus Stahliibacteriota bacterium
33133988 33133988 PRJEB6584e_S_NODE_2175_length_196_cov_3.472050_g2160_i0 PRJEB6584 2175 196 3.47205 6.805218 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42.7 0.00885   NR MBU1083113.1 2052139 g2160 i0 56.7 0.887755102040816 30 13 45.9 0 25 114 104 133 MBU1083113.1 30S ribosomal protein S8 [Patescibacteria group bacterium] diamond 174 42.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
33134281 33134281 PRJEB6584o_S_NODE_20975_length_199_cov_6.823171_g20867_i0 PRJEB6584 20975 199 6.823171 13.57811029 Candidatus Daviesbacteria bacterium GW2 2053542 Bacteria Bacteria 47 6.76e-4   NR KKS14343.1 1618429 g20867 i0 33.9 2.75879396984925 62 41 93.5 0 1 186 598 659 KKS14343.1 MAG: Tetratricopeptide repeat domain protein [Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5] diamond 549 47 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;