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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJEB6584 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25525521 25525521 PRJEB6584o_S_NODE_9985_length_275_cov_3818.916667_g9877_i0 PRJEB6584 9985 275 3818.916667 10502.02083425 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 90.5 8.54e-20   NR YP_009308427.1 180228 g9877 i0 76.8 0.610909090909091 56 13 61.1 0 49 216 184 239 YP_009308427.1 ribosomal protein large subunit 2 [Paramoeba pemaquidensis] diamond 168 90.5 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
25659671 25659671 PRJEB6584e_S_NODE_1330_length_232_cov_3.730964_g1315_i0 PRJEB6584 1330 232 3.730964 8.65583648 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.9 1.3800000000000001e-22   NR XP_004356664.1 1257118 g1315 i0 56.6 1.96551724137931 76 33 98.3 0 228 1 52 127 XP_004356664.1 rho guanine dissociation factor isoform 2, putative [Acanthamoeba castellanii str. Neff] diamond 456 95.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25931988 25931988 PRJEB6584e_S_NODE_516_length_314_cov_42.430108_g501_i0 PRJEB6584 516 314 42.430108 133.23053912 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 147 7.869999999999999e-43   NR KAH3766405.1 1580589 g501 i0 84.7 227.37898089172 85 13 81.2 0 312 58 54 138 KAH3766405.1 histone H2B [Pelomyxa schiedti] diamond 71397 147 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26160752 26160752 PRJEB6584o_S_NODE_853_length_625_cov_49.191525_g797_i0 PRJEB6584 853 625 49.191525 307.44703125 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 107 1.94e-23   NR PRP81227.1 1890364 g797 i0 71.4 2.328 70 20 33.6 0 625 416 318 387 PRP81227.1 S-adenosylmethionine synthetase [Planoprotostelium fungivorum] diamond 1455 107 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32911931 32911931 PRJEB6584e_S_NODE_889_length_268_cov_9.892704_g874_i0 PRJEB6584 889 268 9.892704 26.51244672 Vannella croatica 1778588 Discosea other_Eukaryota 48.1 3.71e-4   NR AUO29185.1 1778588 g874 i0 57.9 0.425373134328358 38 16 42.5 0 159 46 136 173 AUO29185.1 hypothetical protein [Vannella croatica] diamond 114 48.1 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella croatica
32963732 32963732 PRJEB6584o_S_NODE_19802_length_203_cov_2.851190_g19694_i0 PRJEB6584 19802 203 2.85119 5.7879157 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.7 4.54e-18   NR XP_004358308.1 1257118 g19694 i0 61.8 1.61083743842365 55 21 81.3 0 2 166 329 383 XP_004358308.1 papain family cysteine protease subfamily protein [Acanthamoeba castellanii str. Neff] diamond 327 86.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32980515 32980515 PRJEB6584e_S_NODE_1779_length_211_cov_1.272727_g1764_i0 PRJEB6584 1779 211 1.272727 2.68545397 Dictyostelium purpureum 5786 Evosea other_Eukaryota 62 3.82e-9   NR XP_003286736.1 5786 g1764 i0 51.7 3.21327014218009 58 27 82.5 1 3 176 648 704 XP_003286736.1 uncharacterized protein DICPUDRAFT_46984 [Dictyostelium purpureum] diamond 678 62 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32980521 32980521 PRJEB6584e_S_NODE_499_length_318_cov_3.208481_g484_i0 PRJEB6584 499 318 3.208481 10.20296958 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.9 6.05e-4   NR XP_004338595.1 1257118 g484 i0 35.7 0.792452830188679 84 36 78.3 3 281 33 510 576 XP_004338595.1 cullin family protein [Acanthamoeba castellanii str. Neff] diamond 252 48.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32980922 32980922 PRJEB6584o_S_NODE_34859_length_176_cov_3.099291_g34751_i0 PRJEB6584 34859 176 3.099291 5.45475216 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.6 1.6e-13   NR XP_004356664.1 1257118 g34751 i0 63 0.784090909090909 46 17 78.4 0 1 138 153 198 XP_004356664.1 rho guanine dissociation factor isoform 2, putative [Acanthamoeba castellanii str. Neff] diamond 138 71.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32997449 32997449 PRJEB6584h_S_NODE_20947_length_178_cov_1.223776_g20885_i0 PRJEB6584 20947 178 1.223776 2.17832128 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 74.7 2.17e-15   NR 1PRQ_A 5755 g20885 i0 75 1.61797752808989 48 12 80.9 0 2 145 78 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 288 74.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32997910 32997910 PRJEB6584o_S_NODE_46371_length_168_cov_11.278195_g46263_i0 PRJEB6584 46371 168 11.278195 18.9473676 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 68.2 1.38e-11   NR KAH3731747.1 1580589 g46263 i0 70 2.08928571428571 40 12 71.4 0 152 33 389 428 KAH3731747.1 hypothetical protein Pelo_17418 [Pelomyxa schiedti] diamond 351 68.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
33014472 33014472 PRJEB6584e_S_NODE_180_length_426_cov_12.048593_g165_i0 PRJEB6584 180 426 12.048593 51.32700618 Dictyostelium purpureum 5786 Evosea other_Eukaryota 137 2.3e-35   NR XP_003291358.1 5786 g165 i0 53.1 1.00704225352113 143 60 99.3 2 425 3 316 453 XP_003291358.1 actin binding protein [Dictyostelium purpureum] diamond 429 137 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
33025722 33025722 PRJEB6584e_S_NODE_3036_length_172_cov_2.744526_g3021_i0 PRJEB6584 3036 172 2.744526 4.72058472 Acytosteliales 2058181 Evosea other_Eukaryota 45.1 0.00225   NR XP_004358193.1 261658 g3021 i0 74.1 0.976744186046512 27 7 47.1 0 171 91 532 558 XP_004358193.1 putative non-transporter ABC protein [Cavenderia fasciculata] diamond 168 45.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33048541 33048541 PRJEB6584e_S_NODE_677_length_286_cov_12.960159_g662_i0 PRJEB6584 677 286 12.960159 37.06605474 Cavenderia fasciculata 261658 Evosea other_Eukaryota 129 1.08e-33   NR XP_004350709.1 261658 g662 i0 80.2 5.41258741258741 86 17 90.2 0 275 18 3 88 XP_004350709.1 uncharacterized protein DFA_11762 [Cavenderia fasciculata] diamond 1548 129 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33048697 33048697 PRJEB6584o_S_NODE_11933_length_254_cov_5.091324_g11825_i0 PRJEB6584 11933 254 5.091324 12.93196296 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 49.7 6e-5   NR KAH3764251.1 1580589 g11825 i0 45.8 0.566929133858268 48 25 56.7 1 246 103 113 159 KAH3764251.1 hypothetical protein Pelo_3898 [Pelomyxa schiedti] diamond 144 49.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
33065774 33065774 PRJEB6584o_S_NODE_12541_length_248_cov_3.755869_g12433_i0 PRJEB6584 12541 248 3.755869 9.31455512 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.6 1.75e-8   NR XP_004334955.1 1257118 g12433 i0 48.1 0.653225806451613 54 28 65.3 0 224 63 7 60 XP_004334955.1 uncharacterized protein ACA1_096020 [Acanthamoeba castellanii str. Neff] diamond 162 56.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33082723 33082723 PRJEB6584e_S_NODE_1230_length_240_cov_2.741463_g1215_i0 PRJEB6584 1230 240 2.741463 6.5795112 Physarum polycephalum 5791 Evosea other_Eukaryota 67 9.23e-11   NR AAA29967.1 5791 g1215 i0 45.3 0.9375 75 41 93.8 0 238 14 181 255 AAA29967.1 actin-binding protein [Physarum polycephalum] diamond 225 67 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
33082725 33082725 PRJEB6584e_S_NODE_2566_length_183_cov_2.317568_g2551_i0 PRJEB6584 2566 183 2.317568 4.24114944 Polysphondylium violaceum 133409 Evosea other_Eukaryota 90.1 3.4900000000000005e-21   NR KAF2075203.1 133409 g2551 i0 73.3 0.983606557377049 60 16 98.4 0 182 3 3 62 KAF2075203.1 hypothetical protein CYY_003508 [Polysphondylium violaceum] diamond 180 90.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
33082965 33082965 PRJEB6584o_S_NODE_17358_length_214_cov_3.675978_g17250_i0 PRJEB6584 17358 214 3.675978 7.86659292 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 42 0.0495   NR KAH3758012.1 1580589 g17250 i0 50 0.672897196261682 48 21 63.1 2 214 80 597 644 KAH3758012.1 cytohesin 1 [Pelomyxa schiedti] diamond 144 42 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
33093890 33093890 PRJEB6584e_S_NODE_3494_length_163_cov_5.000000_g3479_i0 PRJEB6584 3494 163 5 8.15 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.8 3.68e-9   NR XP_004352812.1 1257118 g3479 i0 73.5 5.04294478527607 34 9 62.6 0 5 106 57 90 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 822 57.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33099759 33099759 PRJEB6584e_S_NODE_2382_length_189_cov_1.155844_g2367_i0 PRJEB6584 2382 189 1.155844 2.18454516 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.5 2.95e-12   NR XP_004344818.1 1257118 g2367 i0 67.3 0.777777777777778 49 16 77.8 0 182 36 380 428 XP_004344818.1 ABC transporter, ATPbinding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 70.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33099762 33099762 PRJEB6584e_S_NODE_2902_length_175_cov_2.250000_g2887_i0 PRJEB6584 2902 175 2.25 3.9375 Cavenderia fasciculata 261658 Evosea other_Eukaryota 88.2 1.44e-18   NR XP_004361176.1 261658 g2887 i0 70.7 7.85142857142857 58 17 99.4 0 2 175 183 240 XP_004361176.1 chaperonin containing TCP1 gamma subunit [Cavenderia fasciculata] diamond 1374 88.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33150963 33150963 PRJEB6584e_S_NODE_1456_length_225_cov_1.452632_g1441_i0 PRJEB6584 1456 225 1.452632 3.268422 Cavenderia fasciculata 261658 Evosea other_Eukaryota 46.6 1.82e-4   NR XP_004361785.1 261658 g1441 i0 68.8 0.426666666666667 32 10 42.7 0 217 122 15 46 XP_004361785.1 actobindin [Cavenderia fasciculata] diamond 96 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33162002 33162002 PRJEB6584e_S_NODE_1728_length_213_cov_1.955056_g1713_i0 PRJEB6584 1728 213 1.955056 4.16426928 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.6 9.65e-4   NR KYQ88739.1 361077 g1713 i0 40.6 1.94366197183099 69 37 95.8 2 211 8 138 203 KYQ88739.1 ubiquitin-conjugating enzyme E2 [Tieghemostelium lacteum] diamond 414 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
33167938 33167938 PRJEB6584e_S_NODE_1288_length_236_cov_4.228856_g1273_i0 PRJEB6584 1288 236 4.228856 9.98010016 Cavenderia deminutiva 361123 Evosea other_Eukaryota 94.7 1.67e-20   NR AOE43201.1 361123 g1273 i0 57 5.73305084745763 79 31 96.6 1 4 231 9 87 AOE43201.1 glutamate-cysteine ligase [Cavenderia deminutiva] diamond 1353 94.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia deminutiva
33168419 33168419 PRJEB6584o_S_NODE_38432_length_173_cov_2.492754_g38324_i0 PRJEB6584 38432 173 2.492754 4.31246442 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 6.27e-4   NR XP_004368149.1 1257118 g38324 i0 46.2 0.676300578034682 39 21 67.6 0 25 141 326 364 XP_004368149.1 TBC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 117 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;