RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJEB65099" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB65099 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1404499 1404499 PRJEB65099_P_NODE_6642_length_243_cov_0.917647_g6537_i0 PRJEB65099 6642 243 0.917647 2.22988221 Meloidogyne enterolobii 390850 Nematoda Nematoda 154 1.71e-41   NR CAD2175649.1 390850 g6537 i0 100 0.987654320987654 80 0 98.8 0 2 241 129 208 CAD2175649.1 unnamed protein product [Meloidogyne enterolobii] diamond 240 154 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
27539541 27539541 PRJEB65099_P_NODE_6084_length_246_cov_0.901734_g5979_i0 PRJEB65099 6084 246 0.901734 2.21826564 Meloidogyne enterolobii 390850 Nematoda Nematoda 157 3e-43   NR CAD2191354.1 390850 g5979 i0 100 0.98780487804878 81 0 98.8 0 2 244 114 194 CAD2191354.1 unnamed protein product [Meloidogyne enterolobii] diamond 243 157 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28139639 28139639 PRJEB65099_P_NODE_5445_length_250_cov_0.881356_g5340_i0 PRJEB65099 5445 250 0.881356 2.20339 Meloidogyne enterolobii 390850 Nematoda Nematoda 141 9.68e-37   NR CAD2201877.1 390850 g5340 i0 94 1.992 83 5 99.6 0 250 2 955 1037 CAD2201877.1 unnamed protein product [Meloidogyne enterolobii] diamond 498 141 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28202305 28202305 PRJEB65099_P_NODE_5006_length_253_cov_0.866667_g4901_i0 PRJEB65099 5006 253 0.866667 2.19266751 Meloidogyne enterolobii 390850 Nematoda Nematoda 126 1.46e-34   NR CAK5047598.1 390850 g4901 i0 84.5 0.841897233201581 71 11 84.2 0 2 214 104 174 CAK5047598.1 unnamed protein product [Meloidogyne enterolobii] diamond 213 126 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28928729 28928729 PRJEB65099_P_NODE_5948_length_247_cov_0.896552_g5843_i0 PRJEB65099 5948 247 0.896552 2.21448344 Meloidogyne enterolobii 390850 Nematoda Nematoda 109 4.05e-29   NR CAD2151794.1 390850 g5843 i0 72 0.995951417004049 82 17 92.3 2 230 3 1 82 CAD2151794.1 unnamed protein product [Meloidogyne enterolobii] diamond 246 109 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
29749356 29749356 PRJEB65099_P_NODE_5311_length_251_cov_0.876404_g5206_i0 PRJEB65099 5311 251 0.876404 2.19977404 Meloidogyne graminicola 189291 Nematoda Nematoda 157 4.029999999999999e-43   NR KAF7632378.1 189291 g5206 i0 92.8 0.99203187250996006 83 6 99.2 0 251 3 33 115 KAF7632378.1 hypothetical protein Mgra_00008227 [Meloidogyne graminicola] diamond 249 157 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
30287074 30287074 PRJEB65099_P_NODE_5752_length_248_cov_0.891429_g5647_i0 PRJEB65099 5752 248 0.891429 2.21074392 Meloidogyne enterolobii 390850 Nematoda Nematoda 165 3.36e-47   NR CAD2188016.1 390850 g5647 i0 100 4.95967741935484 82 0 99.2 0 248 3 82 163 CAD2188016.1 unnamed protein product [Meloidogyne enterolobii] diamond 1230 165 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
30539415 30539415 PRJEB65099_P_NODE_5953_length_247_cov_0.896552_g5848_i0 PRJEB65099 5953 247 0.896552 2.21448344 Meloidogyne enterolobii 390850 Nematoda Nematoda 110 2.6500000000000004e-27   NR CAD2165589.1 390850 g5848 i0 94.2 1.89473684210526 52 3 63.2 0 3 158 244 295 CAD2165589.1 unnamed protein product [Meloidogyne enterolobii] diamond 468 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32815127 32815127 PRJEB65099_P_NODE_4120_length_276_cov_0.802956_g4015_i0 PRJEB65099 4120 276 0.802956 2.2161585600000002 Meloidogyne enterolobii 390850 Nematoda Nematoda 179 2.03e-54   NR CAD2146809.1 390850 g4015 i0 100 1.97826086956522 91 0 98.9 0 275 3 162 252 CAD2146809.1 unnamed protein product [Meloidogyne enterolobii] diamond 546 179 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;