RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30413155 30413155 PRJEB64798_P_NODE_151633_length_187_cov_13.036232_g149867_i0 PRJEB64798 151633 187 13.036232 24.37775384 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 87 4.43e-18   NR MFA5506580.1 3107663 g149867 i0 68.3 0.962566844919786 60 19 96.3 0 181 2 123 182 MFA5506580.1 homoserine dehydrogenase [Vulcanimicrobiota bacterium] diamond 180 87 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31803641 31803641 PRJEB64798_P_NODE_232077_length_158_cov_2.908257_g230311_i0 PRJEB64798 232077 158 2.908257 4.59504606 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 54.3 9.65e-7   NR HEY4002776.1 3036772 g230311 i0 43.8 2.77215189873418 48 27 91.1 0 7 150 258 305 HEY4002776.1 DEAD/DEAH box helicase [Candidatus Xenobia bacterium] diamond 438 54.3 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium
32151815 32151815 PRJEB64798_P_NODE_193218_length_169_cov_3.266667_g191452_i0 PRJEB64798 193218 169 3.266667 5.52066723 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 70.5 1.58e-12   NR MFA7480317.1 3107663 g191452 i0 80 1.42011834319527 40 8 71 0 121 2 243 282 MFA7480317.1 flagellar hook-length control protein FliK [Vulcanimicrobiota bacterium] diamond 240 70.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;