RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Falkowiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30191695 30191695 PRJEB64798_P_NODE_241832_length_154_cov_7.866667_g240066_i0 PRJEB64798 241832 154 7.866667 12.11466718 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 54.3 1.71e-7   NR MFH0891811.1 2053554 g240066 i0 59.2 0.954545454545455 49 19 95.5 1 149 3 15 62 MFH0891811.1 pilin [Candidatus Falkowbacteria bacterium] diamond 147 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
30563651 30563651 PRJEB64798_P_NODE_12553_length_564_cov_11.332039_g10933_i0 PRJEB64798 12553 564 11.332039 63.91269996 Bacillati 1783272 Bacteria Bacteria 77 1.16e-12   NR PJA07655.1 1974555 g10933 i0 55.9 2.66489361702128 59 26 31.4 0 237 413 535 593 PJA07655.1 MAG: hypothetical protein COX69_04155 [Candidatus Falkowbacteria bacterium CG_4_10_14_0_2_um_filter_48_10] diamond 1503 77.4 0.994832041343669 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium CG_4_10_14_0_2_um_filter_48_10
31803722 31803722 PRJEB64798_P_NODE_75937_length_221_cov_4.284884_g74171_i0 PRJEB64798 75937 221 4.284884 9.46959364 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 48.1 3.62e-4   NR QQG53011.1 2053554 g74171 i0 74.2 0.420814479638009 31 8 42.1 0 7 99 2083 2113 QQG53011.1 MAG: fibronectin type III domain-containing protein [Candidatus Falkowbacteria bacterium] diamond 93 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;