RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29907497 29907497 PRJEB64798_P_NODE_168491_length_179_cov_6.046154_g166725_i0 PRJEB64798 168491 179 6.046154 10.82261566 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 47.8 2.63e-4   NR MBI5530361.1 2052150 g166725 i0 42.6 0.905027932960894 54 29 87.2 1 161 6 4 57 MBI5530361.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 162 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
31930215 31930215 PRJEB64798_P_NODE_201257_length_167_cov_1.966102_g199491_i0 PRJEB64798 201257 167 1.966102 3.28339034 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 57.8 6.6e-8   NR MBL8030755.1 2052150 g199491 i0 64.8 0.970059880239521 54 18 95.2 1 161 3 11 64 MBL8030755.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 162 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
32657240 32657240 PRJEB64798_P_NODE_203180_length_166_cov_8.820513_g201414_i0 PRJEB64798 203180 166 8.820513 14.64205158 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 65.1 1.73e-10   NR MDR3642449.1 2052150 g201414 i0 75 0.795180722891566 44 11 79.5 0 148 17 1 44 MDR3642449.1 LysM peptidoglycan-binding domain-containing protein [Candidatus Doudnabacteria bacterium] diamond 132 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;