RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7779748 7779748 PRJEB64798_P_NODE_162387_length_182_cov_4.796992_g160621_i0 PRJEB64798 162387 182 4.796992 8.73052544 Pseudomonadati 3379134 Bacteria Bacteria 102 1.26e-23   NR HNX00565.1 2030808 g160621 i0 84.7 32.0769230769231 59 9 97.3 0 177 1 223 281 HNX00565.1 ribonuclease Y [Candidatus Cloacimonadota bacterium] diamond 5838 102 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
26938694 26938694 PRJEB64798_P_NODE_210562_length_164_cov_11.008696_g208796_i0 PRJEB64798 210562 164 11.008696 18.05426144 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 44.7 8.61e-4   NR MDD4157196.1 2030808 g208796 i0 43.2 0.804878048780488 44 25 80.5 0 159 28 77 120 MDD4157196.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 132 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
28170767 28170767 PRJEB64798_P_NODE_177346_length_175_cov_7.833333_g175580_i0 PRJEB64798 177346 175 7.833333 13.70833275 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 48.9 1.01e-4   NR PID26754.1 2030808 g175580 i0 39.3 4.68 56 34 96 0 8 175 348 403 PID26754.1 MAG: hypothetical protein CR982_08485 [Candidatus Cloacimonadota bacterium] diamond 819 48.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
28384856 28384856 PRJEB64798_P_NODE_127246_length_199_cov_15.613333_g125480_i0 PRJEB64798 127246 199 15.613333 31.07053267 Bacteria 2 Bacteria Bacteria 43.1 0.0145   NR MDD3052528.1 2030808 g125480 i0 53.1 2.95477386934673 32 15 48.2 0 96 191 149 180 MDD3052528.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 588 43.5 0.990804597701149 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30791940 30791940 PRJEB64798_P_NODE_130994_length_198_cov_2.785235_g129228_i0 PRJEB64798 130994 198 2.785235 5.5147653 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 47.4 4.69e-4   NR MCL2063707.1 2030808 g129228 i0 53.8 1.60606060606061 39 12 50 1 166 68 351 389 MCL2063707.1 sigma-54 dependent transcriptional regulator [Candidatus Cloacimonadota bacterium] diamond 318 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32025269 32025269 PRJEB64798_P_NODE_192738_length_169_cov_4.783333_g190972_i0 PRJEB64798 192738 169 4.783333 8.08383277 Candidatus Cloacimonadaceae bacterium 3064664 Bacteria Bacteria 73.9 4.92e-14   NR MFA7030136.1 3064664 g190972 i0 62 4.45562130177515 50 19 88.8 0 161 12 209 258 MFA7030136.1 NADAR family protein [Candidatus Cloacimonadaceae bacterium] diamond 753 73.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae   Candidatus Cloacimonadaceae bacterium
32500146 32500146 PRJEB64798_P_NODE_63899_length_243_cov_5.391753_g62134_i0 PRJEB64798 63899 243 5.391753 13.10195979 Candidatus Syntrophosphaera sp. 2819277 Bacteria Bacteria 45.8 0.0032   NR HOY85643.1 2819277 g62134 i0 40.8 0.876543209876543 71 32 84 4 231 28 1083 1146 HOY85643.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Syntrophosphaera sp.] diamond 213 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Syntrophosphaera Candidatus Syntrophosphaera sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;