RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_phylum = "Atribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Atribacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30096759 30096759 PRJEB64798_P_NODE_125292_length_201_cov_18.072368_g123526_i0 PRJEB64798 125292 201 18.072368 36.32545968 Candidatus Atribacteria bacterium 2053509 Bacteria Bacteria 58.5 5.75e-8   NR NLJ39409.1 2053509 g123526 i0 44.9 2.05970149253731 69 36 100 1 201 1 195 263 NLJ39409.1 site-specific integrase [Candidatus Atribacteria bacterium] diamond 414 58.5 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium
30507634 30507634 PRJEB64798_P_NODE_107813_length_210_cov_15.111801_g106047_i0 PRJEB64798 107813 210 15.111801 31.7347821 Atribacterota bacterium 2952890 Bacteria Bacteria 67.8 3.69e-11   NR HNR64950.1 2952890 g106047 i0 37.4 3.9 91 34 97.1 1 1 204 540 630 HNR64950.1 magnesium-translocating P-type ATPase [Atribacterota bacterium] diamond 819 67.8 1 Bacteria   Pseudomonadati Atribacterota         Atribacterota bacterium
32594777 32594777 PRJEB64798_P_NODE_226300_length_160_cov_3.882883_g224534_i0 PRJEB64798 226300 160 3.882883 6.2126128 Candidatus Atribacteria bacterium 2053509 Bacteria Bacteria 41.6 0.0303   NR HPT77743.1 2053509 g224534 i0 47.5 0.75 40 21 75 0 149 30 297 336 HPT77743.1 ABC transporter substrate-binding protein [Candidatus Atribacteria bacterium] diamond 120 41.6 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;