RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28360105 28360105 PRJEB64798_P_NODE_212866_length_164_cov_1.539130_g211100_i0 PRJEB64798 212866 164 1.53913 2.5241732 Abditibacterium sp. 2109264 Bacteria Bacteria 62 1.04e-9   NR HEX8464666.1 2109264 g211100 i0 61.5 3.82317073170732 52 20 95.1 0 159 4 17 68 HEX8464666.1 DUF1559 domain-containing protein [Abditibacterium sp.] diamond 627 62 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
31930095 31930095 PRJEB64798_P_NODE_103157_length_212_cov_2.533742_g101391_i0 PRJEB64798 103157 212 2.533742 5.37153304 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 44.3 0.00719   NR MBV9866226.1 2800791 g101391 i0 56.3 0.919811320754717 32 14 45.3 0 116 211 28 59 MBV9866226.1 hypothetical protein [Abditibacteriaceae bacterium] diamond 195 44.3 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;