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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 21 ✖

bioproject 1

  • PRJEB64798 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9057074 9057074 PRJEB64798_P_NODE_92648_length_212_cov_5.269939_g90882_i0 PRJEB64798 92648 212 5.269939 11.17227068 Pseudomonadota 1224 Bacteria Bacteria 68.6 1.66e-11   NR OPL08758.1 1775671 g90882 i0 60 16.5 60 20 84.9 1 33 212 206 261 OPL08758.1 MAG: 3-isopropylmalate dehydrogenase [delta proteobacterium ML8_F1] diamond 3498 68.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       delta proteobacterium ML8_F1
26773723 26773723 PRJEB64798_P_NODE_77661_length_218_cov_7.035503_g75895_i0 PRJEB64798 77661 218 7.035503 15.33739654 Thermodesulfobacteriota 200940 Bacteria Bacteria 84 3.29e-17   NR PKN06070.1 2013757 g75895 i0 65.2 11.5183486238532 69 23 95 1 7 213 41 108 PKN06070.1 MAG: glutamine synthetase type III, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-7] diamond 2511 84 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-7
27697600 27697600 PRJEB64798_P_NODE_211744_length_164_cov_3.634783_g209978_i0 PRJEB64798 211744 164 3.634783 5.96104412 uncultured delta proteobacterium HF 34034 Bacteria Bacteria 46.6 5.35e-5   NR ADI18017.1 710831 g209978 i0 82.1 0.51219512195122 28 5 51.2 0 97 14 41 68 ADI18017.1 hypothetical protein [uncultured delta proteobacterium HF0200_19J16] diamond 84 46.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0200_19J16
28296911 28296911 PRJEB64798_P_NODE_131486_length_197_cov_18.864865_g129720_i0 PRJEB64798 131486 197 18.864865000000002 37.16378405 SAR324 cluster bacterium 2024889 Bacteria Bacteria 63.9 1.22e-10   NR MCH2285384.1 2024889 g129720 i0 82.4 0.517766497461929 34 6 51.8 0 107 6 16 49 MCH2285384.1 peptide-methionine (S)-S-oxide reductase MsrA [SAR324 cluster bacterium] diamond 102 63.9 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
28423682 28423682 PRJEB64798_P_NODE_97726_length_212_cov_3.588957_g95960_i0 PRJEB64798 97726 212 3.588957 7.60858884 Deltaproteobacteria bacterium GWA2_38_16 1797802 Bacteria Bacteria 55.8 5.53e-7   NR OGP06050.1 1797802 g95960 i0 71.9 2.40566037735849 32 9 45.3 0 113 208 5 36 OGP06050.1 MAG: hypothetical protein A2Z91_05665 [Deltaproteobacteria bacterium GWA2_38_16] diamond 510 55.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium GWA2_38_16
28676162 28676162 PRJEB64798_P_NODE_238007_length_156_cov_2.373832_g236241_i0 PRJEB64798 238007 156 2.373832 3.70317792 Deltaproteobacteria bacterium DG_8 1703397 Bacteria Bacteria 42.7 0.0111   NR KPJ58876.1 1703397 g236241 i0 45.8 0.923076923076923 48 26 92.3 0 152 9 137 184 KPJ58876.1 MAG: hypothetical protein AMJ42_02475 [Deltaproteobacteria bacterium DG_8] diamond 144 42.7 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium DG_8
28865369 28865369 PRJEB64798_P_NODE_187728_length_171_cov_3.918033_g185962_i0 PRJEB64798 187728 171 3.918033 6.69983643 Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12 1797850 Bacteria Bacteria 68.2 9.43e-12   NR OGQ01437.1 1797850 g185962 i0 61.1 1.91228070175439 54 21 94.7 0 166 5 151 204 OGQ01437.1 MAG: hypothetical protein A2026_09115 [Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12] diamond 327 68.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12
30033892 30033892 PRJEB64798_P_NODE_230851_length_158_cov_6.027523_g229085_i0 PRJEB64798 230851 158 6.027523 9.52348634 SAR324 cluster bacterium 2024889 Bacteria Bacteria 54.3 9.65e-7   NR MDX2470893.1 2024889 g229085 i0 75 1.87974683544304 32 8 60.8 0 98 3 157 188 MDX2470893.1 NTP transferase domain-containing protein [SAR324 cluster bacterium] diamond 297 54.3 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
30539320 30539320 PRJEB64798_P_NODE_242093_length_154_cov_6.400000_g240327_i0 PRJEB64798 242093 154 6.4 9.856 uncultured delta proteobacterium HF 34034 Bacteria Bacteria 44.3 7.96e-4   NR ADI16622.1 710820 g240327 i0 56.4 0.75974025974026 39 17 76 0 123 7 44 82 ADI16622.1 hypothetical protein [uncultured delta proteobacterium HF0010_01J10] diamond 117 44.3 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0010_01J10
30627029 30627029 PRJEB64798_P_NODE_220473_length_162_cov_1.946903_g218707_i0 PRJEB64798 220473 162 1.946903 3.15398286 Bacteria 2 Bacteria Bacteria 47.4 3.01e-4   NR OGQ89419.1 1797895 g218707 i0 40.4 2.87037037037037 52 28 96.3 2 7 162 1203 1251 OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] diamond 465 47.4 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15
31006272 31006272 PRJEB64798_P_NODE_156734_length_185_cov_2.588235_g154968_i0 PRJEB64798 156734 185 2.588235 4.78823475 Pseudomonadota 1224 Bacteria Bacteria 50.8 2.42e-5   NR OGR07127.1 1797902 g154968 i0 37.3 6.76216216216216 59 37 95.7 0 185 9 531 589 OGR07127.1 MAG: hypothetical protein A2511_11255 [Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9] diamond 1251 50.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9
31076490 31076490 PRJEB64798_P_NODE_157875_length_184_cov_7.162963_g156109_i0 PRJEB64798 157875 184 7.162963 13.17985192 Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 2013741 Bacteria Bacteria 41.6 0.0427   NR PKN57799.1 2013741 g156109 i0 42.1 0.929347826086957 57 31 89.7 1 14 178 152 208 PKN57799.1 MAG: di-trans,poly-cis-decaprenylcistransferase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14] diamond 171 41.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14
31076499 31076499 PRJEB64798_P_NODE_163875_length_181_cov_10.242424_g162109_i0 PRJEB64798 163875 181 10.242424 18.53878744 Deltaproteobacteria bacterium RBG_16_48_1 2026735 Bacteria Bacteria 51.2 8.38e-6   NR OGP89063.1 1797839 g162109 i0 44.6 0.92817679558011 56 30 91.2 1 16 180 42 97 OGP89063.1 MAG: hypothetical protein A2156_12750 [Deltaproteobacteria bacterium RBG_16_48_10] diamond 168 51.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_16_48_10
31132418 31132418 PRJEB64798_P_NODE_85575_length_213_cov_3.140244_g83809_i0 PRJEB64798 85575 213 3.140244 6.68871972 Bacteria 2 Bacteria Bacteria 73.2 1.11e-13   NR OGP63352.1 1797831 g83809 i0 93.9 12.1830985915493 33 2 46.5 0 209 111 108 140 OGP63352.1 MAG: S-adenosylmethionine-binding protein [Deltaproteobacteria bacterium RBG_13_53_10] diamond 2595 73.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_13_53_10
31354075 31354075 PRJEB64798_P_NODE_164836_length_181_cov_3.204545_g163070_i0 PRJEB64798 164836 181 3.204545 5.80022645 root 1 Root_unresolved Root_unresolved 43.1 0.00791   NR ADI17622.1 710828 g163070 i0 41.8 2.20441988950276 55 17 66.3 1 170 51 104 158 ADI17622.1 hypothetical protein [uncultured delta proteobacterium HF0130_19C20] diamond 399 43.5 0.990804597701149 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0130_19C20
31961931 31961931 PRJEB64798_P_NODE_237478_length_156_cov_3.224299_g235712_i0 PRJEB64798 237478 156 3.224299 5.02990644 SAR324 cluster bacterium 2024889 Bacteria Bacteria 40 0.0236   NR MCH2300911.1 2024889 g235712 i0 42.2 0.865384615384615 45 26 86.5 0 22 156 29 73 MCH2300911.1 glutathione S-transferase family protein [SAR324 cluster bacterium] diamond 135 40 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
31962031 31962031 PRJEB64798_P_NODE_93178_length_212_cov_5.024540_g91412_i0 PRJEB64798 93178 212 5.02454 10.6520248 Bradymonadales bacterium 2099667 Bacteria Bacteria 45.1 0.00355   NR MFA5623885.1 2099667 g91412 i0 37.8 1.16037735849057 82 25 79.2 1 14 181 6 87 MFA5623885.1 methyltransferase domain-containing protein [Bradymonadales bacterium] diamond 246 45.1 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales     Bradymonadales bacterium
32183450 32183450 PRJEB64798_P_NODE_129918_length_198_cov_5.395973_g128152_i0 PRJEB64798 129918 198 5.395973 10.68402654 uncultured delta proteobacterium HF4 34034 Bacteria Bacteria 76.6 1.4e-15   NR ADI18416.1 710836 g128152 i0 67.3 0.833333333333333 55 17 81.8 1 29 190 28 82 ADI18416.1 hypothetical protein [uncultured delta proteobacterium HF4000_08N17] diamond 165 76.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF4000_08N17
32215190 32215190 PRJEB64798_P_NODE_226598_length_160_cov_3.216216_g224832_i0 PRJEB64798 226598 160 3.216216 5.1459456 Bradymonadales bacterium 2099667 Bacteria Bacteria 65.5 1.11e-10   NR MBS7381833.1 2099667 g224832 i0 58 0.9375 50 21 93.8 0 158 9 374 423 MBS7381833.1 TonB family protein [Bradymonadales bacterium] diamond 150 65.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales     Bradymonadales bacterium
32808092 32808092 PRJEB64798_P_NODE_214260_length_163_cov_15.271930_g212494_i0 PRJEB64798 214260 163 15.27193 24.8932459 Bacteria 2 Bacteria Bacteria 53.9 1.25e-6   NR MDX2469788.1 2024889 g212494 i0 43.1 1.73006134969325 51 29 93.9 0 159 7 188 238 MDX2469788.1 lipase family protein [SAR324 cluster bacterium] diamond 282 54.3 0.992633517495396 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
32877868 32877868 PRJEB64798_P_NODE_114220_length_209_cov_4.531250_g112454_i0 PRJEB64798 114220 209 4.53125 9.4703125 Bradymonadales bacterium 2099667 Bacteria Bacteria 46.6 0.00103   NR TVQ80660.1 2099667 g112454 i0 68.8 1.9377990430622 32 10 45.9 0 205 110 217 248 TVQ80660.1 MAG: UDP-glucose/GDP-mannose dehydrogenase family protein [Bradymonadales bacterium] diamond 405 46.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales     Bradymonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;