RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_clade = "SAR202 cluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • SAR202 cluster · 2 ✖

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29812654 29812654 PRJEB64798_P_NODE_86671_length_212_cov_18.564417_g84905_i0 PRJEB64798 86671 212 18.564417 39.35656404 SAR202 cluster bacterium 2030829 Bacteria Bacteria 49.3 1.17e-4   NR NQW24714.1 2030829 g84905 i0 75 0.509433962264151 36 9 50.9 0 100 207 207 242 NQW24714.1 hypothetical protein [SAR202 cluster bacterium] diamond 108 49.3 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium
32688922 32688922 PRJEB64798_P_NODE_170180_length_178_cov_16.759690_g168414_i0 PRJEB64798 170180 178 16.75969 29.8322482 SAR202 cluster bacterium 2030829 Bacteria Bacteria 50.8 2.17e-5   NR MDP6421113.1 2030829 g168414 i0 66.7 0.455056179775281 27 9 45.5 0 1 81 383 409 MDP6421113.1 IS256 family transposase [SAR202 cluster bacterium] diamond 81 50.8 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;