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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 8 ✖

bioproject 1

  • PRJEB64798 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27444801 27444801 PRJEB64798_P_NODE_137483_length_194_cov_19.772414_g135717_i0 PRJEB64798 137483 194 19.772414 38.35848316 Methanobacterium paludis 868131 Archaea Archaea 66.2 9.91e-11   NR WP_013826057.1 868131 g135717 i0 52.8 4.48453608247423 72 23 94.3 1 8 190 473 544 WP_013826057.1 histidine kinase dimerization/phosphoacceptor domain -containing protein [Methanobacterium paludis] diamond 870 66.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium paludis
28770772 28770772 PRJEB64798_P_NODE_77927_length_218_cov_2.840237_g76161_i0 PRJEB64798 77927 218 2.840237 6.19171666 Methanocaldococcus lauensis 2546128 Archaea Archaea 78.2 1.76e-15   NR CAB3287519.1 2546128 g76161 i0 53.9 1.04587155963303 76 31 99.1 1 2 217 111 186 CAB3287519.1 protein of unknown function [Methanocaldococcus lauensis] diamond 228 78.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus lauensis
30539327 30539327 PRJEB64798_P_NODE_247853_length_152_cov_8.533981_g246087_i0 PRJEB64798 247853 152 8.533981 12.97165112 Methanocaldococcus bathoardescens 1301915 Archaea Archaea 43.5 0.00569   NR AIJ06030.1 1301915 g246087 i0 59.5 0.730263157894737 37 15 73 0 117 7 183 219 AIJ06030.1 hypothetical protein JH146_1188 [Methanocaldococcus bathoardescens] diamond 111 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus bathoardescens
30753616 30753616 PRJEB64798_P_NODE_75934_length_221_cov_4.343023_g74168_i0 PRJEB64798 75934 221 4.343023 9.59808083 Methanobrevibacter 2172 Archaea Archaea 120 8.96e-30   NR WP_295614768.1 253161 g74168 i0 77.5 1.92760180995475 71 16 96.4 0 213 1 683 753 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 426 120 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30943233 30943233 PRJEB64798_P_NODE_118374_length_207_cov_5.645570_g116608_i0 PRJEB64798 118374 207 5.64557 11.6863299 root 1 Root_unresolved Root_unresolved 58.2 3.24e-8   NR MDR3063139.1 66852 g116608 i0 55 16.3623188405797 40 18 58 0 120 1 128 167 MDR3063139.1 AAA family ATPase [Methanobrevibacter sp.] diamond 3387 58.5 0.994871794871795 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31045048 31045048 PRJEB64798_P_NODE_101815_length_212_cov_2.754601_g100049_i0 PRJEB64798 101815 212 2.754601 5.83975412 uncultured Methanobacterium sp. 176306 Archaea Archaea 54.7 1.54e-6   NR WP_321423208.1 176306 g100049 i0 57.1 1.48584905660377 49 17 63.7 2 142 8 291 339 WP_321423208.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [uncultured Methanobacterium sp.] diamond 315 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.
31132373 31132373 PRJEB64798_P_NODE_141555_length_192_cov_13.769231_g139789_i0 PRJEB64798 141555 192 13.769231 26.43692352 root 1 Root_unresolved Root_unresolved 46.6 8.17e-4   NR MBO7695778.1 66852 g139789 i0 57.1 1.140625 35 15 54.7 0 110 6 94 128 MBO7695778.1 anaerobic ribonucleoside-triphosphate reductase [Methanobrevibacter sp.] diamond 219 47 0.991489361702128 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32341829 32341829 PRJEB64798_P_NODE_185779_length_172_cov_2.552846_g184013_i0 PRJEB64798 185779 172 2.552846 4.39089512 Methanobacteriaceae archaeon 2099680 Archaea Archaea 79.3 4.58e-18   NR MBX7076480.1 2099680 g184013 i0 82.9 0.715116279069767 41 7 71.5 0 168 46 12 52 MBX7076480.1 NADH-quinone oxidoreductase subunit A [Methanobacteriaceae archaeon] diamond 123 79.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;