RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJEB64798" and tax_clade = "Apusozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 20 ✖

bioproject 1

  • PRJEB64798 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5231840 5231840 PRJEB64798_P_NODE_61545_length_248_cov_3.929648_g59780_i0 PRJEB64798 61545 248 3.929648 9.74552704 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 118 5.0899999999999994e-30   NR XP_013760592.1 461836 g59780 i0 75.3 2.96370967741935 81 20 98 0 244 2 118 198 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 735 118 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6506253 6506253 PRJEB64798_P_NODE_210626_length_164_cov_10.130435_g208860_i0 PRJEB64798 210626 164 10.130435 16.6139134 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 82 3.48e-17   NR XP_013758080.1 461836 g208860 i0 67.9 0.969512195121951 53 17 97 0 161 3 124 176 XP_013758080.1 60S ribosomal protein L8 [Thecamonas trahens ATCC 50062] diamond 159 82 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9055488 9055488 PRJEB64798_P_NODE_224908_length_160_cov_14.621622_g223142_i0 PRJEB64798 224908 160 14.621622 23.3945952 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.8 3.41e-6   NR XP_013754989.1 461836 g223142 i0 69.7 0.61875 33 10 61.9 0 159 61 152 184 XP_013754989.1 rRNA 2'-O-methyltransferase fibrillarin [Thecamonas trahens ATCC 50062] diamond 99 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23080949 23080949 PRJEB64798_P_NODE_45639_length_291_cov_3.024793_g43874_i0 PRJEB64798 45639 291 3.024793 8.80214763 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 139 9.13e-38   NR XP_013760592.1 461836 g43874 i0 72.3 0.969072164948454 94 26 96.9 0 283 2 161 254 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 282 139 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26678414 26678414 PRJEB64798_P_NODE_59081_length_253_cov_11.480392_g57316_i0 PRJEB64798 59081 253 11.480392 29.04539176 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 1.73e-26   NR XP_013757165.1 461836 g57316 i0 64.6 4.86166007905138 82 29 97.2 0 6 251 93 174 XP_013757165.1 L10e/P0 [Thecamonas trahens ATCC 50062] diamond 1230 108 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26748433 26748433 PRJEB64798_P_NODE_196001_length_168_cov_6.865546_g194235_i0 PRJEB64798 196001 168 6.865546 11.53411728 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 64.7 2.37e-10   NR XP_013754784.1 461836 g194235 i0 51.9 1.91071428571429 54 26 96.4 0 2 163 524 577 XP_013754784.1 major vault protein [Thecamonas trahens ATCC 50062] diamond 321 64.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27001916 27001916 PRJEB64798_P_NODE_227742_length_159_cov_10.290909_g225976_i0 PRJEB64798 227742 159 10.290909 16.36254531 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 45.8 9.68e-4   NR XP_013761543.1 461836 g225976 i0 37.3 0.962264150943396 51 29 90.6 1 15 158 2868 2918 XP_013761543.1 dynein heavy chain 2 [Thecamonas trahens ATCC 50062] diamond 153 45.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27286612 27286612 PRJEB64798_P_NODE_192083_length_169_cov_9.391667_g190317_i0 PRJEB64798 192083 169 9.391667 15.87191723 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 49.7 4.9e-5   NR XP_013759968.1 461836 g190317 i0 44.1 1.04733727810651 59 28 95.9 1 4 165 222 280 XP_013759968.1 flavohemoprotein [Thecamonas trahens ATCC 50062] diamond 177 49.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28455233 28455233 PRJEB64798_P_NODE_35906_length_329_cov_8.900000_g34148_i0 PRJEB64798 35906 329 8.9 29.281 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 64.7 1.63e-9   NR XP_013753886.1 461836 g34148 i0 39.5 0.78419452887538 86 49 78.4 1 269 12 21 103 XP_013753886.1 cysteine proteinase 1 [Thecamonas trahens ATCC 50062] diamond 258 64.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29086654 29086654 PRJEB64798_P_NODE_28648_length_368_cov_2.840125_g26892_i0 PRJEB64798 28648 368 2.840125 10.45166 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 45.4 0.018   NR XP_013757898.1 461836 g26892 i0 28.6 0.970108695652174 119 78 92.9 4 360 19 772 888 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 357 45.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29339010 29339010 PRJEB64798_P_NODE_110069_length_210_cov_5.888199_g108303_i0 PRJEB64798 110069 210 5.888199 12.3652179 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 46.6 0.00108   NR XP_013753128.1 461836 g108303 i0 39.7 0.828571428571429 58 23 82.9 1 35 208 3979 4024 XP_013753128.1 dynein heavy chain [Thecamonas trahens ATCC 50062] diamond 174 46.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31170883 31170883 PRJEB64798_P_NODE_132435_length_197_cov_4.722973_g130669_i0 PRJEB64798 132435 197 4.722973 9.30425681 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 89 2.33e-20   NR XP_013757499.1 461836 g130669 i0 60 1.69035532994924 55 22 83.8 0 166 2 8 62 XP_013757499.1 cysteine and glycine-rich protein 2 [Thecamonas trahens ATCC 50062] diamond 333 89 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31202244 31202244 PRJEB64798_P_NODE_117755_length_207_cov_11.436709_g115989_i0 PRJEB64798 117755 207 11.436709 23.67398763 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 45.1 0.00362   NR XP_013761416.1 461836 g115989 i0 25.4 1.82608695652174 126 35 97.1 2 206 6 1549 1674 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 378 45.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31512397 31512397 PRJEB64798_P_NODE_248176_length_152_cov_6.475728_g246410_i0 PRJEB64798 248176 152 6.475728 9.84310656 root 1 Root_unresolved Root_unresolved 50.8 1.48e-5   NR XP_013754695.1 461836 g246410 i0 52.5 3.11842105263158 40 19 78.9 0 33 152 454 493 XP_013754695.1 methylenetetrahydrofolate reductase [Thecamonas trahens ATCC 50062] diamond 474 51.2 0.9921875 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31550849 31550849 PRJEB64798_P_NODE_113576_length_209_cov_7.368750_g111810_i0 PRJEB64798 113576 209 7.36875 15.4006875 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.4 4.53e-5   NR XP_013755302.1 461836 g111810 i0 62.5 0.91866028708134 32 12 45.9 0 96 1 396 427 XP_013755302.1 uncharacterized protein AMSG_08072 [Thecamonas trahens ATCC 50062] diamond 192 50.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31551029 31551029 PRJEB64798_P_NODE_59516_length_252_cov_14.886700_g57751_i0 PRJEB64798 59516 252 14.8867 37.514484 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 45.1 0.00575   NR XP_013753140.1 461836 g57751 i0 43.2 0.523809523809524 44 25 52.4 0 8 139 159 202 XP_013753140.1 uncharacterized protein AMSG_10829 [Thecamonas trahens ATCC 50062] diamond 132 45.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31614001 31614001 PRJEB64798_P_NODE_223816_length_161_cov_3.535714_g222050_i0 PRJEB64798 223816 161 3.535714 5.69249954 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.8 3.42e-6   NR XP_013755573.1 461836 g222050 i0 62.2 1.37888198757764 37 13 68.9 1 9 119 246 281 XP_013755573.1 cysteine protease CP19 [Thecamonas trahens ATCC 50062] diamond 222 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31930221 31930221 PRJEB64798_P_NODE_209037_length_165_cov_1.465517_g207271_i0 PRJEB64798 209037 165 1.465517 2.41810305 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 78.2 4.27e-15   NR XP_013756296.1 461836 g207271 i0 73.6 3.72727272727273 53 14 96.4 0 4 162 1739 1791 XP_013756296.1 uncharacterized protein AMSG_12057 [Thecamonas trahens ATCC 50062] diamond 615 78.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32752127 32752127 PRJEB64798_P_NODE_252920_length_150_cov_8.891089_g251154_i0 PRJEB64798 252920 150 8.891089 13.3366335 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 67.8 1.48e-11   NR XP_013762088.1 461836 g251154 i0 76.5 0.68 34 8 68 0 143 42 384 417 XP_013762088.1 acid ceramidase subunit beta [Thecamonas trahens ATCC 50062] diamond 102 67.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32846378 32846378 PRJEB64798_P_NODE_145680_length_190_cov_11.035461_g143914_i0 PRJEB64798 145680 190 11.035461 20.9673759 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62 2.97e-9   NR XP_013758156.1 461836 g143914 i0 43.3 0.947368421052632 60 34 94.7 0 7 186 546 605 XP_013758156.1 HIRA-interacting protein 5 [Thecamonas trahens ATCC 50062] diamond 180 62 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;