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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJEB6097" and tax_superkingdom = "Bacteria"

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tax_kingdom 2

tax_superkingdom 1

  • Bacteria · 29 ✖

bioproject 1

  • PRJEB6097 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
125575 125575 PRJEB6097_S_NODE_281_length_463_cov_26976.037383_g227_i0 PRJEB6097 281 463 26976.037383 124899.05308329 Flectobacillus sp. BAB-3569 1509483 Bacteria Bacteria 142 1.1999999999999999e-39   NR WP_095160867.1 1509483 g227 i0 100 0.505399568034557 78 0 50.5 0 461 228 125 202 WP_095160867.1 OmpH family outer membrane protein [Flectobacillus sp. BAB-3569] diamond 234 142 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus sp. BAB-3569
2675646 2675646 PRJEB6097_S_NODE_143_length_536_cov_23544.139721_g89_i0 PRJEB6097 143 536 23544.139721 126196.58890456 Undibacterium luofuense 2828733 Bacteria Bacteria 184 4.049999999999999e-55   NR WP_329604620.1 2828733 g89 i0 94.2 0.576492537313433 103 6 57.6 0 536 228 48 150 WP_329604620.1 DUF3106 domain-containing protein [Undibacterium luofuense] diamond 309 184 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
2675673 2675673 PRJEB6097_S_NODE_6323_length_163_cov_2.070312_g6269_i0 PRJEB6097 6323 163 2.070312 3.37460856 Undibacterium luofuense 2828733 Bacteria Bacteria 99 2.4299999999999994e-24   NR WP_212689400.1 2828733 g6269 i0 100 0.993865030674847 54 0 99.4 0 163 2 133 186 WP_212689400.1 phasin family protein [Undibacterium luofuense] diamond 162 99 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
10328608 10328608 PRJEB6097_S_NODE_1149_length_348_cov_8.156550_g1095_i0 PRJEB6097 1149 348 8.15655 28.384794 Undibacterium luofuense 2828733 Bacteria Bacteria 198 1.57e-62   NR WP_212687423.1 2828733 g1095 i0 96.3 0.939655172413793 109 4 94 0 347 21 73 181 WP_212687423.1 ribosome recycling factor [Undibacterium luofuense] diamond 327 198 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
12879224 12879224 PRJEB6097_S_NODE_591_length_413_cov_30513.613757_g537_i0 PRJEB6097 591 413 30513.613757 126021.22481641 Undibacterium squillarum 1131567 Bacteria Bacteria 116 9.36e-30   NR WP_189359187.1 1131567 g537 i0 95.5 0.479418886198547 66 3 47.9 0 3 200 62 127 WP_189359187.1 hypothetical protein [Undibacterium squillarum] diamond 198 116 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
20526525 20526525 PRJEB6097_S_NODE_5557_length_200_cov_1.454545_g5503_i0 PRJEB6097 5557 200 1.454545 2.90909 Undibacterium luofuense 2828733 Bacteria Bacteria 89.7 4.55e-19   NR WP_212688280.1 2828733 g5503 i0 89.8 0.735 49 5 73.5 0 151 5 1 49 WP_212688280.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Undibacterium luofuense] diamond 147 89.7 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
26685313 26685313 PRJEB6097_S_NODE_6161_length_168_cov_2.661654_g6107_i0 PRJEB6097 6161 168 2.661654 4.47157872 Undibacterium squillarum 1131567 Bacteria Bacteria 71.6 8.96e-13   NR WP_373295317.1 1131567 g6107 i0 100 0.785714285714286 44 0 78.6 0 168 37 82 125 WP_373295317.1 RNA polymerase sigma factor RpoD [Undibacterium squillarum] diamond 132 71.6 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
26812144 26812144 PRJEB6097_S_NODE_6681_length_153_cov_1.016949_g6627_i0 PRJEB6097 6681 153 1.016949 1.55593197 Undibacterium luofuense 2828733 Bacteria Bacteria 62 2.88e-11   NR WP_212689901.1 2828733 g6627 i0 100 0.588235294117647 30 0 58.8 0 1 90 27 56 WP_212689901.1 MotA/TolQ/ExbB proton channel family protein, partial [Undibacterium luofuense] diamond 90 62 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
27602509 27602509 PRJEB6097_S_NODE_6284_length_164_cov_1.821705_g6230_i0 PRJEB6097 6284 164 1.821705 2.9875962 Bacteroidota 976 Bacteria Bacteria 96.7 6.45e-25   NR WP_095162445.1 976 g6230 i0 100 0.878048780487805 48 0 87.8 0 144 1 1 48 WP_095162445.1 MULTISPECIES: histone H1 [Bacteroidota] diamond 144 96.7 1 Bacteria FCB group Pseudomonadati Bacteroidota          
27634025 27634025 PRJEB6097_S_NODE_6324_length_163_cov_1.867188_g6270_i0 PRJEB6097 6324 163 1.867188 3.04351644 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 46.6 5.54e-4   NR MDD4151767.1 2044595 g6270 i0 45.8 0.883435582822086 48 26 88.3 0 159 16 195 242 MDD4151767.1 glucosaminidase domain-containing protein [Candidatus Altimarinota bacterium] diamond 144 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27879699 27879699 PRJEB6097_S_NODE_6325_length_163_cov_1.765625_g6271_i0 PRJEB6097 6325 163 1.765625 2.87796875 Undibacterium 401469 Bacteria Bacteria 74.3 5.19e-14   NR WP_374519713.1 1131567 g6271 i0 91.1 2.48466257668712 45 4 82.8 0 163 29 42 86 WP_374519713.1 D-glycero-beta-D-manno-heptose-7-phosphate kinase [Undibacterium squillarum] diamond 405 74.3 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
28044338 28044338 PRJEB6097_S_NODE_1245_length_343_cov_2.038961_g1191_i0 PRJEB6097 1245 343 2.038961 6.99363623 Flectobacillus longus 2984207 Bacteria Bacteria 180 3.79e-54   NR WP_283369909.1 2984207 g1191 i0 95.5 0.962099125364432 110 5 96.2 0 2 331 161 270 WP_283369909.1 30S ribosomal protein S2 [Flectobacillus longus] diamond 330 180 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus longus
28170655 28170655 PRJEB6097_S_NODE_6226_length_166_cov_1.610687_g6172_i0 PRJEB6097 6226 166 1.610687 2.67374042 Flectobacillus sp. BAB-3569 1509483 Bacteria Bacteria 99.4 1.19e-22   NR WP_095165358.1 1509483 g6172 i0 94.5 0.993975903614458 55 3 99.4 0 166 2 270 324 WP_095165358.1 tetratricopeptide repeat protein [Flectobacillus sp. BAB-3569] diamond 165 99.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus sp. BAB-3569
29086462 29086462 PRJEB6097_S_NODE_2408_length_284_cov_3.000000_g2354_i0 PRJEB6097 2408 284 3 8.52 Undibacterium luofuense 2828733 Bacteria Bacteria 140 1.88e-37   NR WP_212688285.1 2828733 g2354 i0 92.1 0.802816901408451 76 6 80.3 0 2 229 343 418 WP_212688285.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Undibacterium luofuense] diamond 228 140 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
29528442 29528442 PRJEB6097_S_NODE_2570_length_281_cov_47521.256098_g2516_i0 PRJEB6097 2570 281 47521.256098 133534.72963538 Blautia luti 89014 Bacteria Bacteria 52.4 4.99e-6   NR WP_207705784.1 89014 g2516 i0 96 0.266903914590747 25 1 26.7 0 201 127 80 104 WP_207705784.1 hypothetical protein, partial [Blautia luti] diamond 75 52.4 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia luti
29805613 29805613 PRJEB6097_S_NODE_5931_length_177_cov_1.866197_g5877_i0 PRJEB6097 5931 177 1.866197 3.30316869 Bacteroidota 976 Bacteria Bacteria 57.8 7.87e-8   NR WP_166549688.1 2683263 g5877 i0 74.6 2 59 15 100 0 1 177 178 236 WP_166549688.1 translation initiation factor IF-2 [Cellulophaga sp. BC115SP] diamond 354 57.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
30223145 30223145 PRJEB6097_S_NODE_6232_length_166_cov_1.221374_g6178_i0 PRJEB6097 6232 166 1.221374 2.02748084 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 67 3.62e-11   NR MDD2744996.1 2044595 g6178 i0 63.6 0.993975903614458 55 20 99.4 0 166 2 229 283 MDD2744996.1 protein translocase subunit SecD [Candidatus Altimarinota bacterium] diamond 165 67 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30381583 30381583 PRJEB6097_S_NODE_5753_length_187_cov_2.098684_g5699_i0 PRJEB6097 5753 187 2.098684 3.92453908 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 82.8 1.31e-16   NR MFA6091046.1 2044595 g5699 i0 65 1.92513368983957 60 21 96.3 0 3 182 604 663 MFA6091046.1 efflux RND transporter permease subunit [Candidatus Altimarinota bacterium] diamond 360 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30823526 30823526 PRJEB6097_S_NODE_5954_length_176_cov_1.716312_g5900_i0 PRJEB6097 5954 176 1.716312 3.02070912 Flectobacillus longus 2984207 Bacteria Bacteria 116 3.42e-30   NR WP_283371007.1 2984207 g5900 i0 100 0.988636363636364 58 0 98.9 0 174 1 112 169 WP_283371007.1 type I methionyl aminopeptidase [Flectobacillus longus] diamond 174 116 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus longus
30981691 30981691 PRJEB6097_S_NODE_5834_length_182_cov_2.170068_g5780_i0 PRJEB6097 5834 182 2.170068 3.94952376 Bacteroidota 976 Bacteria Bacteria 44.3 0.00331   NR WP_095160744.1 976 g5780 i0 100 0.32967032967033 20 0 33 0 182 123 166 185 WP_095160744.1 MULTISPECIES: 50S ribosomal protein L5 [Bacteroidota] diamond 60 44.3 1 Bacteria FCB group Pseudomonadati Bacteroidota          
31234118 31234118 PRJEB6097_S_NODE_6815_length_150_cov_1.104348_g6761_i0 PRJEB6097 6815 150 1.104348 1.656522 Undibacterium squillarum 1131567 Bacteria Bacteria 50.4 2.04e-5   NR WP_373295317.1 1131567 g6761 i0 100 0.52 26 0 52 0 73 150 57 82 WP_373295317.1 RNA polymerase sigma factor RpoD [Undibacterium squillarum] diamond 78 50.4 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
31677015 31677015 PRJEB6097_S_NODE_5817_length_183_cov_2.540541_g5763_i0 PRJEB6097 5817 183 2.540541 4.64919003 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 56.2 9.11e-8   NR MBX9724270.1 2364082 g5763 i0 100 0.409836065573771 25 0 41 0 183 109 146 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 75 56.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31771947 31771947 PRJEB6097_S_NODE_5537_length_201_cov_5.126506_g5483_i0 PRJEB6097 5537 201 5.126506 10.30427706 Cellulophaga sp. BC115SP 2683263 Bacteria Bacteria 89.4 1.7e-20   NR WP_166549596.1 2683263 g5483 i0 97.7 0.656716417910448 44 1 65.7 0 201 70 128 171 WP_166549596.1 ExbD/TolR family protein [Cellulophaga sp. BC115SP] diamond 132 89.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
31835068 31835068 PRJEB6097_S_NODE_5577_length_198_cov_2.208589_g5523_i0 PRJEB6097 5577 198 2.208589 4.37300622 Pseudarcicella hirudinis 1079859 Bacteria Bacteria 132 2.709999999999999e-38   NR WP_092018866.1 1079859 g5523 i0 100 0.984848484848485 65 0 98.5 0 2 196 26 90 WP_092018866.1 30S ribosomal protein S6 [Pseudarcicella hirudinis] diamond 195 132 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Pseudarcicella Pseudarcicella hirudinis
31866722 31866722 PRJEB6097_S_NODE_1757_length_310_cov_6.265455_g1703_i0 PRJEB6097 1757 310 6.265455 19.4229105 Undibacterium luofuense 2828733 Bacteria Bacteria 96.3 2.9099999999999996e-23   NR WP_212688905.1 2828733 g1703 i0 98.8 0.82258064516129 85 1 82.3 0 295 41 7 91 WP_212688905.1 hypothetical protein [Undibacterium luofuense] diamond 255 96.3 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
32088364 32088364 PRJEB6097_S_NODE_6458_length_159_cov_1.258065_g6404_i0 PRJEB6097 6458 159 1.258065 2.00032335 Flectobacillus longus 2984207 Bacteria Bacteria 77.8 6.61e-17   NR WP_283325609.1 2984207 g6404 i0 100 0.849056603773585 45 0 84.9 0 137 3 1 45 WP_283325609.1 hypothetical protein [Flectobacillus longus] diamond 135 77.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus longus
32215027 32215027 PRJEB6097_S_NODE_6138_length_169_cov_1.194030_g6084_i0 PRJEB6097 6138 169 1.19403 2.0179107 Pseudarcicella hirudinis 1079859 Bacteria Bacteria 99 6.399999999999999e-24   NR SFP43801.1 1079859 g6084 i0 100 0.994082840236686 56 0 99.4 0 1 168 81 136 SFP43801.1 large subunit ribosomal protein L27 [Pseudarcicella hirudinis] diamond 168 99 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Pseudarcicella Pseudarcicella hirudinis
32499925 32499925 PRJEB6097_S_NODE_179_length_511_cov_49582.470588_g125_i0 PRJEB6097 179 511 49582.470588 253366.42470468 Blautia luti 89014 Bacteria Bacteria 53.5 1.4e-5   NR WP_207705784.1 89014 g125 i0 100 0.146771037181996 25 0 14.7 0 201 127 80 104 WP_207705784.1 hypothetical protein, partial [Blautia luti] diamond 75 53.5 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia luti
32877839 32877839 PRJEB6097_S_NODE_860_length_371_cov_34227.300595_g806_i0 PRJEB6097 860 371 34227.300595 126983.28520745 Blautia luti 89014 Bacteria Bacteria 51.6 2.45e-5   NR WP_207705784.1 89014 g806 i0 71.8 0.517520215633423 39 6 27.5 1 198 97 81 119 WP_207705784.1 hypothetical protein, partial [Blautia luti] diamond 192 51.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia luti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;