RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB6097" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB6097 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29528442 29528442 PRJEB6097_S_NODE_2570_length_281_cov_47521.256098_g2516_i0 PRJEB6097 2570 281 47521.256098 133534.72963538 Blautia luti 89014 Bacteria Bacteria 52.4 4.99e-6   NR WP_207705784.1 89014 g2516 i0 96 0.266903914590747 25 1 26.7 0 201 127 80 104 WP_207705784.1 hypothetical protein, partial [Blautia luti] diamond 75 52.4 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia luti
32499925 32499925 PRJEB6097_S_NODE_179_length_511_cov_49582.470588_g125_i0 PRJEB6097 179 511 49582.470588 253366.42470468 Blautia luti 89014 Bacteria Bacteria 53.5 1.4e-5   NR WP_207705784.1 89014 g125 i0 100 0.146771037181996 25 0 14.7 0 201 127 80 104 WP_207705784.1 hypothetical protein, partial [Blautia luti] diamond 75 53.5 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia luti
32877839 32877839 PRJEB6097_S_NODE_860_length_371_cov_34227.300595_g806_i0 PRJEB6097 860 371 34227.300595 126983.28520745 Blautia luti 89014 Bacteria Bacteria 51.6 2.45e-5   NR WP_207705784.1 89014 g806 i0 71.8 0.517520215633423 39 6 27.5 1 198 97 81 119 WP_207705784.1 hypothetical protein, partial [Blautia luti] diamond 192 51.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia luti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;