RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB6055" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6055 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26646705 26646705 PRJEB6055_S_NODE_5841_length_151_cov_3.043103_g5817_i0 PRJEB6055 5841 151 3.043103 4.59508553 Opisthokonta 33154 Fungi Fungi 60.8 2.3e-10   NR KAK9680935.1 34480 g5817 i0 75.7 8.06622516556291 37 9 73.5 0 150 40 64 100 KAK9680935.1 60S ribosomal protein L9B [Basidiobolus ranarum] diamond 1218 60.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
26812142 26812142 PRJEB6055_S_NODE_5741_length_152_cov_2.307692_g5717_i0 PRJEB6055 5741 152 2.307692 3.50769184 Coemansia asiatica 1052880 Fungi Fungi 46.2 4.83e-4   NR KAJ1647732.1 1052880 g5717 i0 55.3 1.85526315789474 47 21 92.8 0 2 142 157 203 KAJ1647732.1 60S ribosomal protein L16A [Coemansia asiatica] diamond 282 46.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia asiatica
32404873 32404873 PRJEB6055_S_NODE_2739_length_197_cov_2.561728_g2715_i0 PRJEB6055 2739 197 2.561728 5.04660416 Piptocephalis cylindrospora 1907219 Fungi Fungi 60.8 1.41e-9   NR RKP13868.1 1907219 g2715 i0 81.6 4.06598984771574 38 6 57.9 1 5 118 120 156 RKP13868.1 ribosomal protein S17-domain-containing protein [Piptocephalis cylindrospora] diamond 801 60.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis cylindrospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;