RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB6055" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6055 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7369760 7369760 PRJEB6055_S_NODE_4786_length_163_cov_2.414062_g4762_i0 PRJEB6055 4786 163 2.414062 3.93492106 Agaricomycetes 155619 Fungi Fungi 92.4 2.02e-22   NR VWO94102.1 34458 g4762 i0 80.9 4.10429447852761 47 9 86.5 0 2 142 67 113 VWO94102.1 2-cysteine peroxiredoxin, partial [Ganoderma boninense] diamond 669 92.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
23077567 23077567 PRJEB6055_S_NODE_4359_length_169_cov_1.492537_g4335_i0 PRJEB6055 4359 169 1.492537 2.52238753 Ceraceosorus guamensis 1522189 Fungi Fungi 87.8 2.51e-19   NR XP_025368547.1 1522189 g4335 i0 75 0.994082840236686 56 14 99.4 0 2 169 166 221 XP_025368547.1 ribosomal protein S3Ae [Ceraceosorus guamensis] diamond 168 87.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Ceraceosorales Ceraceosoraceae Ceraceosorus Ceraceosorus guamensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;