RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJEB6054" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6054 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25931299 25931299 PRJEB6054_S_NODE_3676_length_246_cov_1.473934_g3587_i0 PRJEB6054 3676 246 1.473934 3.62587764 Adineta ricciae 249248 Rotifera other_Eukaryota 59.3 4.95e-9   NR CAF0747866.1 249248 g3587 i0 98.6 0.890243902439024 73 1 89 0 1 219 46 118 CAF0747866.1 unnamed protein product [Adineta ricciae] diamond 219 59.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
26203527 26203527 PRJEB6054_S_NODE_15654_length_151_cov_2.043103_g15565_i0 PRJEB6054 15654 151 2.043103 3.08508553 Adineta ricciae 249248 Rotifera other_Eukaryota 88.6 5.81e-19   NR CAF1678654.1 249248 g15565 i0 98 0.973509933774834 49 1 97.4 0 149 3 396 444 CAF1678654.1 unnamed protein product, partial [Adineta ricciae] diamond 147 88.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32928885 32928885 PRJEB6054_S_NODE_2505_length_283_cov_2.911290_g2416_i0 PRJEB6054 2505 283 2.91129 8.2389507 Adineta ricciae 249248 Rotifera other_Eukaryota 49.7 2.12e-4   NR CAF1014340.1 249248 g2416 i0 74.3 0.371024734982332 35 6 33.9 1 282 187 208 242 CAF1014340.1 unnamed protein product [Adineta ricciae] diamond 105 49.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
33031391 33031391 PRJEB6054_S_NODE_7044_length_198_cov_0.981595_g6955_i0 PRJEB6054 7044 198 0.981595 1.9435581 Brachionus plicatilis 10195 Rotifera other_Eukaryota 105 2.49e-25   NR RNA36125.1 10195 g6955 i0 82 0.924242424242424 61 10 90.9 1 198 19 255 315 RNA36125.1 guanine nucleotide-binding subunit beta-2-like 1 [Brachionus plicatilis] diamond 183 105 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
33031407 33031407 PRJEB6054_S_NODE_9860_length_178_cov_1.958042_g9771_i0 PRJEB6054 9860 178 1.958042 3.48531476 Adineta ricciae 249248 Rotifera other_Eukaryota 61.6 3.75e-10   NR CAF0730632.1 249248 g9771 i0 96.7 1.01123595505618 30 1 50.6 0 178 89 107 136 CAF0730632.1 unnamed protein product [Adineta ricciae] diamond 180 61.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
33042602 33042602 PRJEB6054_S_NODE_5668_length_215_cov_1.655556_g5579_i0 PRJEB6054 5668 215 1.655556 3.5594454 Adineta 104781 Rotifera other_Eukaryota 93.2 1.43e-22   NR CAF0980491.1 249248 g5579 i0 95.7 1.93953488372093 47 2 65.6 0 213 73 26 72 CAF0980491.1 unnamed protein product [Adineta ricciae] diamond 417 93.6 0.995726495726496 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
33082438 33082438 PRJEB6054_S_NODE_10966_length_171_cov_1.757353_g10877_i0 PRJEB6054 10966 171 1.757353 3.00507363 Adineta ricciae 249248 Rotifera other_Eukaryota 55.8 3.29e-7   NR CAF1526813.1 249248 g10877 i0 92.6 0.473684210526316 27 2 47.4 0 3 83 615 641 CAF1526813.1 unnamed protein product [Adineta ricciae] diamond 81 55.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
33150695 33150695 PRJEB6054_S_NODE_13824_length_157_cov_1.639344_g13735_i0 PRJEB6054 13824 157 1.639344 2.57377008 Adineta vaga 104782 Rotifera other_Eukaryota 50.4 1.59e-5   NR UJR14360.1 104782 g13735 i0 90.9 0.420382165605096 22 2 42 0 3 68 204 225 UJR14360.1 hypothetical protein I4U23_001356 [Adineta vaga] diamond 66 50.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;