RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB6054" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6054 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33099539 33099539 PRJEB6054_S_NODE_5870_length_212_cov_2.259887_g5781_i0 PRJEB6054 5870 212 2.259887 4.79096044 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 45.4 0.00271   NR KAK3714885.1 3060491 g5781 i0 33.8 3.84905660377358 68 41 96.2 1 206 3 218 281 KAK3714885.1 hypothetical protein QZH41_001874 [Actinostola sp. cb2023] diamond 816 45.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
33150670 33150670 PRJEB6054_S_NODE_11408_length_168_cov_3.902256_g11319_i0 PRJEB6054 11408 168 3.902256 6.55579008 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 52.8 1.9e-6   NR XP_066914128.1 252671 g11319 i0 72.2 0.642857142857143 36 10 64.3 0 166 59 154 189 XP_066914128.1 small ribosomal subunit protein uS4 [Clytia hemisphaerica] diamond 108 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;