RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB6054" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6054 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33014237 33014237 PRJEB6054_S_NODE_4020_length_238_cov_5.049261_g3931_i0 PRJEB6054 4020 238 5.0492610000000004 12.01724118 Anoplophora glabripennis 217634 Arthropoda Arthropoda 102 7.3e-26   NR XP_018578213.1 217634 g3931 i0 84.1 7.02100840336134 63 10 79.4 0 218 30 71 133 XP_018578213.1 ubiquitin-like protein FUBI [Anoplophora glabripennis] diamond 1671 102 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Cerambycidae Anoplophora Anoplophora glabripennis
33048278 33048278 PRJEB6054_S_NODE_3037_length_264_cov_6.449782_g2948_i0 PRJEB6054 3037 264 6.449782 17.02742448 Nephila pilipes 299642 Arthropoda Arthropoda 47.8 5.22e-4   NR GFT36626.1 299642 g2948 i0 48.4 1.45454545454545 64 29 72.7 2 50 241 66 125 GFT36626.1 hypothetical protein NPIL_642691 [Nephila pilipes] diamond 384 47.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Nephila Nephila pilipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;