RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJEB6054" and tax_kingdom = "Fungi"

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tax_superkingdom 1

tax_kingdom 1

  • Fungi · 12 ✖

tax_clade 1

bioproject 1

  • PRJEB6054 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25795162 25795162 PRJEB6054_S_NODE_627_length_430_cov_1165.840506_g544_i0 PRJEB6054 627 430 1165.840506 5013.1141758 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 150 1.0899999999999999e-43   NR ORX65579.1 1314790 g544 i0 64.5 0.865116279069767 124 44 86.5 0 429 58 1 124 ORX65579.1 hypothetical protein K493DRAFT_309421 [Basidiobolus meristosporus CBS 931.73] diamond 372 150 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
26203652 26203652 PRJEB6054_S_NODE_4070_length_237_cov_3.549505_g3981_i0 PRJEB6054 4070 237 3.549505 8.41232685 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 111 5.56e-28   NR PJF16614.1 1246581 g3981 i0 80.3 0.962025316455696 76 15 96.2 0 2 229 153 228 PJF16614.1 40S ribosomal protein S6 [Paramicrosporidium saccamoebae] diamond 228 111 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32911646 32911646 PRJEB6054_S_NODE_13849_length_157_cov_1.229508_g13760_i0 PRJEB6054 13849 157 1.229508 1.93032756 Ambispora gerdemannii 144530 Fungi Fungi 74.7 5.65e-14   NR CAG8551313.1 144530 g13760 i0 62 1.91082802547771 50 19 95.5 0 4 153 351 400 CAG8551313.1 4766_t:CDS:2 [Ambispora gerdemannii] diamond 300 74.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Ambisporaceae Ambispora Ambispora gerdemannii
32928912 32928912 PRJEB6054_S_NODE_7897_length_190_cov_2.535484_g7808_i0 PRJEB6054 7897 190 2.535484 4.8174196 Cercophora scortea 314031 Fungi Fungi 42 0.0147   NR KAK3335352.1 314031 g7808 i0 39.1 0.726315789473684 46 28 72.6 0 167 30 82 127 KAK3335352.1 hypothetical protein B0T19DRAFT_5808 [Cercophora scortea] diamond 138 42 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Lasiosphaeriaceae Cercophora Cercophora scortea
32957416 32957416 PRJEB6054_S_NODE_8154_length_188_cov_1.790850_g8065_i0 PRJEB6054 8154 188 1.79085 3.366798 Eukaryota 2759 Fungi Fungi 43.9 0.00682   NR KAJ3093258.1 109957 g8065 i0 77.3 2.80851063829787 22 5 35.1 0 1 66 279 300 KAJ3093258.1 cross-pathway control WD-repeat protein cpc2, partial [Physocladia obscura] diamond 528 43.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Physocladia Physocladia obscura
32980272 32980272 PRJEB6054_S_NODE_2203_length_296_cov_5.126437_g2114_i0 PRJEB6054 2203 296 5.126437 15.17425352 Cladochytrium replicatum 109936 Fungi Fungi 60.1 5.37e-8   NR KAI8806647.1 109936 g2114 i0 56 0.506756756756757 50 22 50.7 0 294 145 176 225 KAI8806647.1 hypothetical protein BJ742DRAFT_354064 [Cladochytrium replicatum] diamond 150 60.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
32980285 32980285 PRJEB6054_S_NODE_3891_length_241_cov_2.466019_g3802_i0 PRJEB6054 3891 241 2.466019 5.94310579 Mucor plumbeus 97098 Fungi Fungi 60.1 2.79e-8   NR KAG2203666.1 97098 g3802 i0 68.2 1.65560165975104 44 14 54.8 0 232 101 484 527 KAG2203666.1 hypothetical protein INT46_004300 [Mucor plumbeus] diamond 399 60.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
32997207 32997207 PRJEB6054_S_NODE_987_length_380_cov_36.562319_g899_i0 PRJEB6054 987 380 36.562319 138.9368122 Gigaspora rosea 44941 Fungi Fungi 65.1 9.4e-11   NR RIA99826.1 44941 g899 i0 50.6 3.74210526315789 77 26 59.2 2 33 257 1 67 RIA99826.1 hypothetical protein C2G38_1995017 [Gigaspora rosea] diamond 1422 65.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora rosea
33065341 33065341 PRJEB6054_S_NODE_10293_length_175_cov_1.428571_g10204_i0 PRJEB6054 10293 175 1.428571 2.49999925 Jimgerdemannia flammicorona 994334 Fungi Fungi 52.8 8.57e-7   NR RUS34214.1 994334 g10204 i0 41.5 0.908571428571429 53 30 90.9 1 168 10 36 87 RUS34214.1 hypothetical protein BC938DRAFT_481852 [Jimgerdemannia flammicorona] diamond 159 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Endogonomycetes Endogonales Endogonaceae Jimgerdemannia Jimgerdemannia flammicorona
33065401 33065401 PRJEB6054_S_NODE_7029_length_198_cov_1.993865_g6940_i0 PRJEB6054 7029 198 1.993865 3.9478527 Gigaspora rosea 44941 Fungi Fungi 48.1 9.12e-5   NR RIB09757.1 44941 g6940 i0 62.5 0.96969696969697 32 12 48.5 0 197 102 112 143 RIB09757.1 cofilin [Gigaspora rosea] diamond 192 48.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora rosea
33076666 33076666 PRJEB6054_S_NODE_4501_length_232_cov_2.172589_g4412_i0 PRJEB6054 4501 232 2.172589 5.04040648 Rhizoclosmatium 109967 Fungi Fungi 76.3 1.14e-15   NR ORY47366.1 329046 g4412 i0 71.7 4.11206896551724 53 14 67.2 1 232 77 74 126 ORY47366.1 Profilin/allergen [Rhizoclosmatium globosum] diamond 954 76.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Rhizoclosmatium Rhizoclosmatium globosum
33116581 33116581 PRJEB6054_S_NODE_7991_length_189_cov_4.824675_g7902_i0 PRJEB6054 7991 189 4.824675 9.11863575 Batrachochytrium dendrobatidis JAM81 684364 Fungi Fungi 62.8 1.51e-9   NR XP_006680774.1 684364 g7902 i0 63 1.63492063492063 46 17 73 0 187 50 359 404 XP_006680774.1 uncharacterized protein BATDEDRAFT_35621 [Batrachochytrium dendrobatidis JAM81] diamond 309 62.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;