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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJEB58983" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 35 ✖

bioproject 1

  • PRJEB58983 · 35 ✖

analysis 1

  • diamond · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
125118 125118 PRJEB58983_P_NODE_4221_length_595_cov_2.226054_g3813_i0 PRJEB58983 4221 595 2.226054 13.2450213 archaeon 1906665 Archaea Archaea 326 3.159999999999999e-110   NR RYG64625.1 1906665 g3813 i0 82.8 0.998319327731092 198 34 99.8 0 595 2 19 216 RYG64625.1 MAG: 50S ribosomal protein L3, partial [archaeon] diamond 594 326 1 Archaea               archaeon
9052113 9052113 PRJEB58983_P_NODE_23128_length_274_cov_1.024876_g22713_i0 PRJEB58983 23128 274 1.024876 2.80816024 archaeon 1906665 Archaea Archaea 174 5.96e-54   NR RYH05217.1 1906665 g22713 i0 85.6 0.985401459854015 90 13 98.5 0 274 5 7 96 RYH05217.1 MAG: 50S ribosomal protein L15 [archaeon] diamond 270 174 1 Archaea               archaeon
14153665 14153665 PRJEB58983_P_NODE_9252_length_410_cov_1.029674_g8838_i0 PRJEB58983 9252 410 1.029674 4.2216634 root 1 Root_unresolved Root_unresolved 161 4.19e-44   NR MBX7076496.1 2099680 g8838 i0 62.6 1.8 123 46 90 0 370 2 128 250 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 738 161 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
20118543 20118543 PRJEB58983_P_NODE_10236_length_391_cov_1.078616_g9821_i0 PRJEB58983 10236 391 1.078616 4.21738856 archaeon 1906665 Archaea Archaea 176 4.98e-53   NR RYG68693.1 1906665 g9821 i0 67.5 0.9207161125319692 120 39 92.1 0 360 1 1 120 RYG68693.1 MAG: hypothetical protein EON64_04640 [archaeon] diamond 360 176 1 Archaea               archaeon
26843897 26843897 PRJEB58983_P_NODE_25261_length_264_cov_1.240838_g24846_i0 PRJEB58983 25261 264 1.240838 3.27581232 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 58.5 1.34e-7   NR MCW4013121.1 2026714 g24846 i0 33.3 0.988636363636364 87 58 98.9 0 1 261 410 496 MCW4013121.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 261 58.5 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
26843909 26843909 PRJEB58983_P_NODE_34361_length_229_cov_2.673077_g33946_i0 PRJEB58983 34361 229 2.673077 6.12134633 Methanobacteriota archaeon 2026739 Archaea Archaea 50.1 7.98e-5   NR RYE96869.1 2026739 g33946 i0 68.4 0.497816593886463 38 12 49.8 0 101 214 326 363 RYE96869.1 MAG: hypothetical protein EOO41_04130, partial [Methanobacteriota archaeon] diamond 114 50.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27159752 27159752 PRJEB58983_P_NODE_35062_length_215_cov_5.218310_g34647_i0 PRJEB58983 35062 215 5.21831 11.2193665 archaeon 1906665 Archaea Archaea 48.1 2.85e-4   NR MCQ2819776.1 1906665 g34647 i0 31.4 2.90232558139535 70 48 97.7 0 5 214 142 211 MCQ2819776.1 40S ribosomal protein S3a/S1 [archaeon] diamond 624 48.1 1 Archaea               archaeon
27191523 27191523 PRJEB58983_P_NODE_28582_length_251_cov_1.331461_g28167_i0 PRJEB58983 28582 251 1.331461 3.34196711 archaeon 1906665 Archaea Archaea 56.6 2.53e-7   NR RYY73121.1 1906665 g28167 i0 34 1.1593625498008 97 45 93.2 1 251 18 82 178 RYY73121.1 MAG: hypothetical protein EON63_20180 [archaeon] diamond 291 56.6 1 Archaea               archaeon
27191532 27191532 PRJEB58983_P_NODE_3522_length_655_cov_2.067010_g3119_i0 PRJEB58983 3522 655 2.06701 13.5389155 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 44.7 0.0342   NR OLS15083.1 1849166 g3119 i0 34.8 0.421374045801527 92 58 41.7 2 119 391 23 113 OLS15083.1 MAG: transcriptional modulator of MazE/toxin MazF [Promethearchaeota archaeon CR_4] diamond 276 44.7 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
27223055 27223055 PRJEB58983_P_NODE_23523_length_272_cov_1.527638_g23108_i0 PRJEB58983 23523 272 1.527638 4.15517536 archaeon 1906665 Archaea Archaea 99.4 6.87e-22   NR RYG70223.1 1906665 g23108 i0 48 1.08088235294118 98 42 98.2 2 268 2 2921 3018 RYG70223.1 MAG: hypothetical protein EON64_00770, partial [archaeon] diamond 294 99.4 1 Archaea               archaeon
27413109 27413109 PRJEB58983_P_NODE_26983_length_256_cov_2.398907_g26568_i0 PRJEB58983 26983 256 2.398907 6.14120192 archaeon 1906665 Archaea Archaea 57.4 3.04e-7   NR RYG70220.1 1906665 g26568 i0 43.8 0.75 64 36 75 0 246 55 392 455 RYG70220.1 MAG: hypothetical protein EON64_00755 [archaeon] diamond 192 57.4 1 Archaea               archaeon
27539249 27539249 PRJEB58983_P_NODE_30584_length_246_cov_1.589595_g30169_i0 PRJEB58983 30584 246 1.589595 3.9104037 Thermoplasmata archaeon 1906666 Archaea Archaea 95.9 2.51e-21   NR RLF38486.1 1906666 g30169 i0 68.7 3.41463414634146 67 21 81.7 0 242 42 3 69 RLF38486.1 MAG: molecular chaperone DnaJ [Thermoplasmata archaeon] diamond 840 95.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27633995 27633995 PRJEB58983_P_NODE_19184_length_295_cov_1.369369_g18769_i0 PRJEB58983 19184 295 1.369369 4.03963855 archaeon 1906665 Archaea Archaea 187 2.5699999999999993e-53   NR RYG69930.1 1906665 g18769 i0 83.5 0.986440677966102 97 16 98.6 0 3 293 461 557 RYG69930.1 MAG: hypothetical protein EON64_01505 [archaeon] diamond 291 187 1 Archaea               archaeon
27665642 27665642 PRJEB58983_P_NODE_28464_length_251_cov_2.106742_g28049_i0 PRJEB58983 28464 251 2.106742 5.28792242 archaeon 1906665 Archaea Archaea 52.4 2.04e-6   NR RYG65510.1 1906665 g28049 i0 53.8 0.466135458167331 39 18 46.6 0 2 118 69 107 RYG65510.1 MAG: thiol reductase thioredoxin [archaeon] diamond 117 52.4 1 Archaea               archaeon
27665645 27665645 PRJEB58983_P_NODE_30444_length_246_cov_2.959538_g30029_i0 PRJEB58983 30444 246 2.959538 7.28046348 archaeon 1906665 Archaea Archaea 59.7 1.41e-9   NR RYH18504.1 1906665 g30029 i0 52.5 0.719512195121951 59 26 72 1 39 215 22 78 RYH18504.1 MAG: hypothetical protein EON65_27160 [archaeon] diamond 177 59.7 1 Archaea               archaeon
28132426 28132426 PRJEB58983_P_NODE_29505_length_249_cov_0.886364_g29090_i0 PRJEB58983 29505 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 42.7 0.0385   NR HII04504.1 2024843 g29090 i0 34.8 2.20481927710843 69 45 83.1 0 211 5 228 296 HII04504.1 hypothetical protein [Nitrosopumilus sp.] diamond 549 43.1 0.990719257540603 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
28328401 28328401 PRJEB58983_P_NODE_27126_length_256_cov_1.125683_g26711_i0 PRJEB58983 27126 256 1.125683 2.88174848 archaeon 1906665 Archaea Archaea 115 1.18e-27   NR RYG70223.1 1906665 g26711 i0 67.9 0.94921875 81 26 94.9 0 5 247 3088 3168 RYG70223.1 MAG: hypothetical protein EON64_00770, partial [archaeon] diamond 243 115 1 Archaea               archaeon
28675944 28675944 PRJEB58983_P_NODE_20007_length_290_cov_1.368664_g19592_i0 PRJEB58983 20007 290 1.368664 3.9691256 archaeon 1906665 Archaea Archaea 44.3 0.0196   NR RYH22144.1 1906665 g19592 i0 28 0.775862068965517 75 54 77.6 0 234 10 2597 2671 RYH22144.1 MAG: hypothetical protein EON65_19655, partial [archaeon] diamond 225 44.3 1 Archaea               archaeon
29433291 29433291 PRJEB58983_P_NODE_25230_length_264_cov_1.596859_g24815_i0 PRJEB58983 25230 264 1.596859 4.21570776 archaeon 1906665 Archaea Archaea 47.4 4.39e-4   NR MCQ2816580.1 1906665 g24815 i0 41.4 2.09090909090909 58 34 65.9 0 43 216 16 73 MCQ2816580.1 EF-hand domain-containing protein [archaeon] diamond 552 47.4 1 Archaea               archaeon
29685852 29685852 PRJEB58983_P_NODE_26970_length_256_cov_2.540984_g26555_i0 PRJEB58983 26970 256 2.540984 6.50491904 archaeon 1906665 Archaea Archaea 103 2.4799999999999994e-23   NR RYH30569.1 1906665 g26555 i0 52.9 2.00390625 85 40 99.6 0 255 1 1564 1648 RYH30569.1 MAG: hypothetical protein EON65_04765 [archaeon] diamond 513 103 1 Archaea               archaeon
30033722 30033722 PRJEB58983_P_NODE_29151_length_249_cov_3.187500_g28736_i0 PRJEB58983 29151 249 3.1875 7.936875 archaeon 1906665 Archaea Archaea 61.2 9.96e-9   NR RYG67299.1 1906665 g28736 i0 75.8 0.397590361445783 33 8 39.8 0 248 150 195 227 RYG67299.1 MAG: hypothetical protein EON64_07745, partial [archaeon] diamond 99 61.2 1 Archaea               archaeon
30191475 30191475 PRJEB58983_P_NODE_29432_length_249_cov_0.886364_g29017_i0 PRJEB58983 29432 249 0.886364 2.20704636 archaeon 1906665 Archaea Archaea 58.5 1.03e-7   NR RYG68854.1 1906665 g29017 i0 32.1 0.975903614457831 81 55 97.6 0 2 244 298 378 RYG68854.1 MAG: hypothetical protein EON64_04205 [archaeon] diamond 243 58.5 1 Archaea               archaeon
30318533 30318533 PRJEB58983_P_NODE_28032_length_252_cov_3.385475_g27617_i0 PRJEB58983 28032 252 3.385475 8.531397 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 47.4 0.00102   NR MEM4326278.1 2026773 g27617 i0 60 0.476190476190476 40 16 47.6 0 246 127 1 40 MEM4326278.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 120 47.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30318544 30318544 PRJEB58983_P_NODE_34532_length_228_cov_2.522581_g34117_i0 PRJEB58983 34532 228 2.522581 5.75148468 archaeon 1906665 Archaea Archaea 126 5.68e-36   NR RYG96209.1 1906665 g34117 i0 82.7 0.986842105263158 75 13 98.7 0 3 227 15 89 RYG96209.1 MAG: hypothetical protein EON65_54770, partial [archaeon] diamond 225 126 1 Archaea               archaeon
30539112 30539112 PRJEB58983_P_NODE_26753_length_257_cov_2.239130_g26338_i0 PRJEB58983 26753 257 2.23913 5.7545641 archaeon 1906665 Archaea Archaea 49.7 1.64e-4   NR RYH20990.1 1906665 g26338 i0 34.6 0.945525291828794 81 53 94.6 0 257 15 747 827 RYH20990.1 MAG: hypothetical protein EON65_21815 [archaeon] diamond 243 49.7 1 Archaea               archaeon
31076387 31076387 PRJEB58983_P_NODE_29435_length_249_cov_0.886364_g29020_i0 PRJEB58983 29435 249 0.886364 2.20704636 archaeon 1906665 Archaea Archaea 52.8 1.09e-5   NR NCQ51914.1 1906665 g29020 i0 34.1 1.02409638554217 85 51 100 2 1 249 110 191 NCQ51914.1 hypothetical protein [archaeon] diamond 255 52.8 1 Archaea               archaeon
31076389 31076389 PRJEB58983_P_NODE_30895_length_245_cov_2.186047_g30480_i0 PRJEB58983 30895 245 2.186047 5.35581515 archaeon 1906665 Archaea Archaea 113 1.57e-30   NR RYH04918.1 1906665 g30480 i0 89.2 0.795918367346939 65 7 79.6 0 245 51 33 97 RYH04918.1 MAG: 50S ribosomal protein L24 [archaeon] diamond 195 113 1 Archaea               archaeon
31423992 31423992 PRJEB58983_P_NODE_16936_length_312_cov_2.334728_g16521_i0 PRJEB58983 16936 312 2.334728 7.28435136 archaeon 1906665 Archaea Archaea 48.1 9.14e-5   NR RYG59588.1 1906665 g16521 i0 72.7 0.317307692307692 33 8 31.7 1 261 163 5 36 RYG59588.1 MAG: hypothetical protein EON64_20075, partial [archaeon] diamond 99 48.1 1 Archaea               archaeon
31930048 31930048 PRJEB58983_P_NODE_16937_length_312_cov_2.322176_g16522_i0 PRJEB58983 16937 312 2.322176 7.24518912 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 67.4 1.91e-10   NR MEM3851705.1 1906667 g16522 i0 80.5 1.61538461538462 41 8 39.4 0 150 28 55 95 MEM3851705.1 leucine--tRNA ligase [Methanomassiliicoccales archaeon] diamond 504 67.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
32341682 32341682 PRJEB58983_P_NODE_28759_length_250_cov_3.971751_g28344_i0 PRJEB58983 28759 250 3.971751 9.9293775 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 54.3 3.19e-6   NR HWY35735.1 2202732 g28344 i0 44 0.9 75 42 90 0 239 15 249 323 HWY35735.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 225 54.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
32468314 32468314 PRJEB58983_P_NODE_28319_length_252_cov_0.871508_g27904_i0 PRJEB58983 28319 252 0.871508 2.19620016 archaeon 1906665 Archaea Archaea 68.2 4.88e-11   NR RYH26391.1 1906665 g27904 i0 89.2 0.44047619047619 37 4 44 0 111 1 1095 1131 RYH26391.1 MAG: hypothetical protein EON65_14630 [archaeon] diamond 111 68.2 1 Archaea               archaeon
32499905 32499905 PRJEB58983_P_NODE_33599_length_234_cov_3.186335_g33184_i0 PRJEB58983 33599 234 3.186335 7.4560239 archaeon 1906665 Archaea Archaea 100 2.7699999999999996e-23   NR RYH28547.1 1906665 g33184 i0 60.3 1 78 31 100 0 234 1 44 121 RYH28547.1 MAG: hypothetical protein EON65_11770 [archaeon] diamond 234 100 1 Archaea               archaeon
32814839 32814839 PRJEB58983_P_NODE_30300_length_247_cov_0.896552_g29885_i0 PRJEB58983 30300 247 0.896552 2.21448344 archaeon 1906665 Archaea Archaea 107 4.91e-25   NR RYG67429.1 1906665 g29885 i0 66.7 0.983805668016194 81 27 98.4 0 246 4 180 260 RYG67429.1 MAG: hypothetical protein EON64_07455 [archaeon] diamond 243 107 1 Archaea               archaeon
32846292 32846292 PRJEB58983_P_NODE_33320_length_236_cov_2.865031_g32905_i0 PRJEB58983 33320 236 2.865031 6.76147316 archaeon 1906665 Archaea Archaea 82.4 7.48e-18   NR RYG69502.1 1906665 g32905 i0 50.7 1.79237288135593 73 34 92.8 1 228 10 68 138 RYG69502.1 MAG: hypothetical protein EON64_02535 [archaeon] diamond 423 82.4 1 Archaea               archaeon
32877798 32877798 PRJEB58983_P_NODE_2040_length_887_cov_2.379607_g1690_i0 PRJEB58983 2040 887 2.379607 21.10711409 Methanobacteriota archaeon 2026739 Archaea Archaea 135 2.28e-33   NR RZD42880.1 2026739 g1690 i0 34.8 0.980834272829763 290 172 93.7 6 838 8 12 297 RZD42880.1 MAG: hypothetical protein CXT73_02100 [Methanobacteriota archaeon] diamond 870 135 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;