RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB58983" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB58983 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27539249 27539249 PRJEB58983_P_NODE_30584_length_246_cov_1.589595_g30169_i0 PRJEB58983 30584 246 1.589595 3.9104037 Thermoplasmata archaeon 1906666 Archaea Archaea 95.9 2.51e-21   NR RLF38486.1 1906666 g30169 i0 68.7 3.41463414634146 67 21 81.7 0 242 42 3 69 RLF38486.1 MAG: molecular chaperone DnaJ [Thermoplasmata archaeon] diamond 840 95.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31930048 31930048 PRJEB58983_P_NODE_16937_length_312_cov_2.322176_g16522_i0 PRJEB58983 16937 312 2.322176 7.24518912 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 67.4 1.91e-10   NR MEM3851705.1 1906667 g16522 i0 80.5 1.61538461538462 41 8 39.4 0 150 28 55 95 MEM3851705.1 leucine--tRNA ligase [Methanomassiliicoccales archaeon] diamond 504 67.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;