RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB58983" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB58983 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28675958 28675958 PRJEB58983_P_NODE_33687_length_234_cov_2.093168_g33272_i0 PRJEB58983 33687 234 2.093168 4.89801312 Planctomycetota bacterium 2026780 Bacteria Bacteria 47 2.97e-4   NR MBM4038888.1 2026780 g33272 i0 38.4 0.935897435897436 73 44 92.3 1 5 220 55 127 MBM4038888.1 hypothetical protein [Planctomycetota bacterium] diamond 219 47 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29464772 29464772 PRJEB58983_P_NODE_23550_length_272_cov_1.190955_g23135_i0 PRJEB58983 23550 272 1.190955 3.2393976 Planctomycetota bacterium 2026780 Bacteria Bacteria 61.2 1.69e-8   NR MEM9942907.1 2026780 g23135 i0 35.2 1.94117647058824 88 56 96 1 9 269 668 755 MEM9942907.1 hypothetical protein [Planctomycetota bacterium] diamond 528 61.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29464792 29464792 PRJEB58983_P_NODE_9390_length_406_cov_5.945946_g8976_i0 PRJEB58983 9390 406 5.945946 24.14054076 Candidatus Brocadiales bacterium 2760054 Bacteria Bacteria 68.2 7.01e-11   NR MBC8550112.1 2760054 g8976 i0 36.4 0.731527093596059 99 60 70.9 1 2 289 1 99 MBC8550112.1 hypothetical protein [Candidatus Brocadiales bacterium] diamond 297 68.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales     Candidatus Brocadiales bacterium
30728678 30728678 PRJEB58983_P_NODE_28874_length_250_cov_1.740113_g28459_i0 PRJEB58983 28874 250 1.740113 4.3502825 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 108 2.82e-25   NR HEV8605080.1 2876886 g28459 i0 60.8 1.92 79 31 94.8 0 245 9 2830 2908 HEV8605080.1 proprotein convertase P-domain-containing protein [Tepidisphaeraceae bacterium] diamond 480 108 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
31487531 31487531 PRJEB58983_P_NODE_30376_length_247_cov_0.867816_g29961_i0 PRJEB58983 30376 247 0.867816 2.14350552 Planctomycetota bacterium 2026780 Bacteria Bacteria 76.6 6.95e-15   NR MFP6738218.1 2026780 g29961 i0 53.9 0.923076923076923 76 34 91.1 1 243 19 109 184 MFP6738218.1 hypothetical protein [Planctomycetota bacterium] diamond 228 76.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32563222 32563222 PRJEB58983_P_NODE_5399_length_529_cov_1.092105_g4986_i0 PRJEB58983 5399 529 1.092105 5.77723545 Pirellulaceae bacterium 2699754 Bacteria Bacteria 53.5 1.09e-4   NR MEX2174072.1 2699754 g4986 i0 54.8 0.793950850661626 42 19 23.8 0 390 515 198 239 MEX2174072.1 hypothetical protein [Pirellulaceae bacterium] diamond 420 53.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;