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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJEB58983" and tax_phylum = "Deinococcota"

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tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJEB58983 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
124943 124943 PRJEB58983_P_NODE_27281_length_255_cov_1.714286_g26866_i0 PRJEB58983 27281 255 1.714286 4.3714293 Deinococcus misasensis 392413 Bacteria Bacteria 119 6.66e-29   NR WP_034339137.1 392413 g26866 i0 100 0.682352941176471 58 0 68.2 0 2 175 718 775 WP_034339137.1 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein [Deinococcus misasensis] diamond 174 119 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
124999 124999 PRJEB58983_P_NODE_30181_length_247_cov_1.568966_g29766_i0 PRJEB58983 30181 247 1.568966 3.87534602 Deinococcus misasensis 392413 Bacteria Bacteria 167 4.32e-50   NR WP_034344118.1 392413 g29766 i0 100 0.995951417004049 82 0 99.6 0 247 2 102 183 WP_034344118.1 electron transfer flavoprotein subunit beta/FixA family protein [Deinococcus misasensis] diamond 246 167 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
1399306 1399306 PRJEB58983_P_NODE_22462_length_277_cov_1.313725_g22047_i0 PRJEB58983 22462 277 1.313725 3.63901825 Deinococcus roseus 392414 Bacteria Bacteria 186 3.8399999999999997e-53   NR WP_188998899.1 392414 g22047 i0 98.9 0.996389891696751 92 1 99.6 0 276 1 120 211 WP_188998899.1 ATP-dependent Clp protease ATP-binding subunit [Deinococcus roseus] diamond 276 186 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
1399596 1399596 PRJEB58983_P_NODE_3942_length_614_cov_3.290203_g3536_i0 PRJEB58983 3942 614 3.290203 20.20184642 Deinococcus misasensis 392413 Bacteria Bacteria 346 7.429999999999999e-118   NR WP_034334850.1 392413 g3536 i0 97.8 0.86970684039088 178 4 87 0 535 2 1 178 WP_034334850.1 complex I NDUFA9 subunit family protein [Deinococcus misasensis] diamond 534 346 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
2674848 2674848 PRJEB58983_P_NODE_18383_length_301_cov_1.271930_g17968_i0 PRJEB58983 18383 301 1.27193 3.8285093 Deinococcus roseus 392414 Bacteria Bacteria 186 7.949999999999999e-56   NR WP_189002451.1 392414 g17968 i0 93.9 0.976744186046512 98 6 97.7 0 299 6 136 233 WP_189002451.1 BMP family lipoprotein [Deinococcus roseus] diamond 294 186 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
9920290 9920290 PRJEB58983_P_NODE_16548_length_315_cov_2.723140_g16133_i0 PRJEB58983 16548 315 2.72314 8.577891 Deinococcus misasensis 392413 Bacteria Bacteria 177 1e-55   NR WP_034339520.1 392413 g16133 i0 100 0.80952380952381 85 0 81 0 261 7 1 85 WP_034339520.1 cold-shock protein [Deinococcus misasensis] diamond 255 177 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
13745516 13745516 PRJEB58983_P_NODE_17651_length_306_cov_2.592275_g17236_i0 PRJEB58983 17651 306 2.592275 7.9323615 Deinococcus misasensis 392413 Bacteria Bacteria 186 2.39e-53   NR WP_034340944.1 392413 g17236 i0 99 0.990196078431373 101 1 99 0 2 304 385 485 WP_034340944.1 ATP-binding protein [Deinococcus misasensis] diamond 303 186 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
19250619 19250619 PRJEB58983_P_NODE_31656_length_244_cov_0.888889_g31241_i0 PRJEB58983 31656 244 0.888889 2.16888916 Deinococcus misasensis 392413 Bacteria Bacteria 128 6.49e-36   NR WP_034342016.1 392413 g31241 i0 95.5 0.823770491803279 67 3 82.4 0 243 43 86 152 WP_034342016.1 hypothetical protein [Deinococcus misasensis] diamond 201 128 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
27065139 27065139 PRJEB58983_P_NODE_5342_length_532_cov_2.047930_g4929_i0 PRJEB58983 5342 532 2.04793 10.8949876 Deinococcus cellulosilyticus 401558 Bacteria Bacteria 162 1.9999999999999998e-42   NR WP_146891557.1 401558 g4929 i0 48.4 1.06015037593985 188 70 93.6 3 500 3 718 900 WP_146891557.1 S-layer homology domain-containing protein [Deinococcus cellulosilyticus] diamond 564 162 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus cellulosilyticus
27128009 27128009 PRJEB58983_P_NODE_9522_length_404_cov_2.290030_g9108_i0 PRJEB58983 9522 404 2.29003 9.2517212 Deinococcus misasensis 392413 Bacteria Bacteria 265 1.75e-83   NR WP_245618372.1 392413 g9108 i0 98.5 0.995049504950495 134 2 99.5 0 2 403 406 539 WP_245618372.1 ABC transporter substrate-binding protein [Deinococcus misasensis] diamond 402 265 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
27318228 27318228 PRJEB58983_P_NODE_4043_length_607_cov_2.086142_g3636_i0 PRJEB58983 4043 607 2.086142 12.66288194 Deinococcus misasensis 392413 Bacteria Bacteria 83.2 1.4e-14   NR WP_034343365.1 392413 g3636 i0 93.3 1.17133443163097 193 13 95.4 0 28 606 231 423 WP_034343365.1 S-layer homology domain-containing protein [Deinococcus misasensis] diamond 711 83.2 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
27343143 27343143 PRJEB58983_P_NODE_26163_length_260_cov_1.245989_g25748_i0 PRJEB58983 26163 260 1.245989 3.2395714 Deinococcus 1298 Bacteria Bacteria 90.5 7.24e-19   NR WP_291428517.1 47478 g25748 i0 57.1 2.90769230769231 84 35 96.9 1 1 252 161 243 WP_291428517.1 hypothetical protein [Deinococcus sp.] diamond 756 90.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
27539264 27539264 PRJEB58983_P_NODE_8064_length_436_cov_2.820937_g7650_i0 PRJEB58983 8064 436 2.820937 12.29928532 Deinococcus misasensis 392413 Bacteria Bacteria 189 1.6499999999999996e-52   NR WP_034343365.1 392413 g7650 i0 67.1 2.00229357798165 146 47 99.8 1 435 1 941 1086 WP_034343365.1 S-layer homology domain-containing protein [Deinococcus misasensis] diamond 873 189 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
27728980 27728980 PRJEB58983_P_NODE_27484_length_254_cov_2.149171_g27069_i0 PRJEB58983 27484 254 2.149171 5.45889434 Deinococcus misasensis 392413 Bacteria Bacteria 155 7.399999999999998e-44   NR WP_342668530.1 392413 g27069 i0 98.8 0.992125984251969 84 1 99.2 0 253 2 183 266 WP_342668530.1 ABC transporter permease [Deinococcus misasensis] diamond 252 155 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
27760499 27760499 PRJEB58983_P_NODE_27504_length_254_cov_1.928177_g27089_i0 PRJEB58983 27504 254 1.928177 4.89756958 Deinococcus misasensis 392413 Bacteria Bacteria 144 4.97e-40   NR WP_034341371.1 392413 g27089 i0 100 0.874015748031496 74 0 87.4 0 2 223 165 238 WP_034341371.1 DNA-directed RNA polymerase subunit alpha [Deinococcus misasensis] diamond 222 144 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
27791860 27791860 PRJEB58983_P_NODE_29504_length_249_cov_0.886364_g29089_i0 PRJEB58983 29504 249 0.886364 2.20704636 Deinococcus misasensis 392413 Bacteria Bacteria 154 2.0999999999999996e-41   NR WP_034344668.1 392413 g29089 i0 92.7 0.987951807228916 82 6 98.8 0 3 248 205 286 WP_034344668.1 BamA/OMP85 family outer membrane protein [Deinococcus misasensis] diamond 246 154 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
28075811 28075811 PRJEB58983_P_NODE_9765_length_399_cov_2.487730_g9351_i0 PRJEB58983 9765 399 2.48773 9.9260427 Deinococcus misasensis 392413 Bacteria Bacteria 255 3.01e-83   NR WP_034334850.1 392413 g9351 i0 98.4 0.93984962406015 125 2 94 0 3 377 168 292 WP_034334850.1 complex I NDUFA9 subunit family protein [Deinococcus misasensis] diamond 375 255 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
28328403 28328403 PRJEB58983_P_NODE_28926_length_250_cov_1.502825_g28511_i0 PRJEB58983 28926 250 1.502825 3.7570625 Deinococcus sedimenti 1867090 Bacteria Bacteria 115 7.55e-32   NR WP_189071260.1 1867090 g28511 i0 91.8 0.732 61 5 73.2 0 25 207 1 61 WP_189071260.1 hypothetical protein [Deinococcus sedimenti] diamond 183 115 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sedimenti
29591098 29591098 PRJEB58983_P_NODE_20730_length_286_cov_1.309859_g20315_i0 PRJEB58983 20730 286 1.309859 3.74619674 Deinococcus misasensis 392413 Bacteria Bacteria 185 1.67e-56   NR WP_034338184.1 392413 g20315 i0 100 0.996503496503496 95 0 99.7 0 285 1 34 128 WP_034338184.1 enoyl-CoA hydratase/isomerase family protein [Deinococcus misasensis] diamond 285 185 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
29812342 29812342 PRJEB58983_P_NODE_22631_length_276_cov_1.793103_g22216_i0 PRJEB58983 22631 276 1.793103 4.94896428 Deinococcus roseus 392414 Bacteria Bacteria 179 3.99e-53   NR WP_229684824.1 392414 g22216 i0 95.7 1 92 4 100 0 276 1 147 238 WP_229684824.1 urea ABC transporter substrate-binding protein [Deinococcus roseus] diamond 276 179 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
30223125 30223125 PRJEB58983_P_NODE_4612_length_570_cov_2.378270_g4203_i0 PRJEB58983 4612 570 2.37827 13.556139 Deinococcus misasensis 392413 Bacteria Bacteria 224 3.8e-64   NR WP_034343365.1 392413 g4203 i0 90.4 0.989473684210526 188 18 98.9 0 568 5 25 212 WP_034343365.1 S-layer homology domain-containing protein [Deinococcus misasensis] diamond 564 224 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
30350098 30350098 PRJEB58983_P_NODE_13612_length_343_cov_4.822222_g13197_i0 PRJEB58983 13612 343 4.822222 16.54022146 Deinococcus misasensis 392413 Bacteria Bacteria 223 6.329999999999999e-72   NR WP_051963039.1 392413 g13197 i0 100 0.997084548104956 114 0 99.7 0 342 1 77 190 WP_051963039.1 Crp/Fnr family transcriptional regulator [Deinococcus misasensis] diamond 342 223 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
31202175 31202175 PRJEB58983_P_NODE_26595_length_258_cov_1.578378_g26180_i0 PRJEB58983 26595 258 1.578378 4.07221524 Deinococcus misasensis 392413 Bacteria Bacteria 147 1.69e-40   NR WP_034341891.1 392413 g26180 i0 88.4 1 86 10 100 0 1 258 54 139 WP_034341891.1 type II secretion system F family protein [Deinococcus misasensis] diamond 258 147 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
31487517 31487517 PRJEB58983_P_NODE_20736_length_286_cov_1.225352_g20321_i0 PRJEB58983 20736 286 1.225352 3.50450672 Deinococcus roseus 392414 Bacteria Bacteria 174 1.29e-53   NR WP_229684872.1 392414 g20321 i0 94.7 2.98951048951049 95 4 99.7 1 1 285 19 112 WP_229684872.1 extracellular solute-binding protein, partial [Deinococcus roseus] diamond 855 174 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
31740185 31740185 PRJEB58983_P_NODE_26817_length_257_cov_1.608696_g26402_i0 PRJEB58983 26817 257 1.608696 4.13434872 Deinococcus misasensis 392413 Bacteria Bacteria 160 2.19e-43   NR WP_169743888.1 392413 g26402 i0 96.5 0.992217898832685 85 3 99.2 0 3 257 677 761 WP_169743888.1 FtsX-like permease family protein [Deinococcus misasensis] diamond 255 160 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
31993396 31993396 PRJEB58983_P_NODE_29858_length_248_cov_0.891429_g29443_i0 PRJEB58983 29858 248 0.891429 2.21074392 Deinococcus misasensis 392413 Bacteria Bacteria 167 5.83e-51   NR WP_034342783.1 392413 g29443 i0 100 0.991935483870968 82 0 99.2 0 3 248 29 110 WP_034342783.1 LEA type 2 family protein [Deinococcus misasensis] diamond 246 167 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
32436693 32436693 PRJEB58983_P_NODE_22779_length_275_cov_2.673267_g22364_i0 PRJEB58983 22779 275 2.673267 7.35148425 Deinococcus roseus 392414 Bacteria Bacteria 126 2.88e-33   NR WP_189005853.1 392414 g22364 i0 95.3 0.698181818181818 64 3 69.8 0 275 84 243 306 WP_189005853.1 GTP cyclohydrolase FolE2 [Deinococcus roseus] diamond 192 126 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
32563226 32563226 PRJEB58983_P_NODE_9519_length_404_cov_2.498489_g9105_i0 PRJEB58983 9519 404 2.498489 10.09389556 Deinococcus misasensis 392413 Bacteria Bacteria 146 9.85e-38   NR WP_034343365.1 392413 g9105 i0 62.1 0.98019801980198 132 44 96.5 4 402 13 591 718 WP_034343365.1 S-layer homology domain-containing protein [Deinococcus misasensis] diamond 396 146 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
32657101 32657101 PRJEB58983_P_NODE_23060_length_274_cov_1.562189_g22645_i0 PRJEB58983 23060 274 1.562189 4.28039786 Deinococcus misasensis 392413 Bacteria Bacteria 187 1.3e-55   NR WP_034340354.1 392413 g22645 i0 100 0.985401459854015 90 0 98.5 0 3 272 60 149 WP_034340354.1 allantoinase AllB [Deinococcus misasensis] diamond 270 187 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;