RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB58983" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB58983 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7777266 7777266 PRJEB58983_P_NODE_19667_length_292_cov_1.082192_g19252_i0 PRJEB58983 19667 292 1.082192 3.16000064 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 172 1.06e-49   NR MBC7527023.1 2739509 g19252 i0 91.8 4.98287671232877 97 8 99.7 0 2 292 127 223 MBC7527023.1 type II secretion system F family protein [Chthonomonadaceae bacterium] diamond 1455 172 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
32783235 32783235 PRJEB58983_P_NODE_32640_length_241_cov_2.351190_g32225_i0 PRJEB58983 32640 241 2.35119 5.6663679 Armatimonadetes bacterium Cent15-Ar3 1987502 Bacteria Bacteria 95.1 3.3400000000000003e-22   NR OWU65760.1 1987502 g32225 i0 59.7 0.896265560165975 72 28 88.4 1 27 239 59 130 OWU65760.1 MAG: hypothetical protein CBB60_003025 [Armatimonadetes bacterium Cent15-Ar3] diamond 216 95.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Cent15-Ar3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;