RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB58983" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB58983 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1399691 1399691 PRJEB58983_P_NODE_8102_length_435_cov_2.596685_g7688_i0 PRJEB58983 8102 435 2.596685 11.29557975 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 203 2.1999999999999997e-62   NR XP_009025699.1 6412 g7688 i0 71.7 10 145 40 99.3 1 434 3 36 180 XP_009025699.1 hypothetical protein HELRODRAFT_107583 [Helobdella robusta] diamond 4350 203 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
27633998 27633998 PRJEB58983_P_NODE_20364_length_288_cov_1.427907_g19949_i0 PRJEB58983 20364 288 1.427907 4.11237216 Owenia fusiformis 6347 Annelida Annelida 108 1.19e-27   NR CAH1786556.1 6347 g19949 i0 57.3 3.69791666666667 89 36 90.6 2 2 262 15 103 CAH1786556.1 unnamed protein product [Owenia fusiformis] diamond 1065 108 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32120128 32120128 PRJEB58983_P_NODE_4578_length_572_cov_1.773547_g4169_i0 PRJEB58983 4578 572 1.773547 10.14468884 Owenia fusiformis 6347 Annelida Annelida 178 3.78e-53   NR CAH1784699.1 6347 g4169 i0 53.4 5.54895104895105 176 76 92.3 2 44 571 1 170 CAH1784699.1 unnamed protein product [Owenia fusiformis] diamond 3174 178 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;