RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJEB56699" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJEB56699 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2674664 2674664 PRJEB56699_P_NODE_2863_length_321_cov_3.061644_g2633_i0 PRJEB56699 2863 321 3.061644 9.82787724 Tolivirales sp. 2809914 Viruses Viruses 117 5.75e-28   NR WRQ65272.1 2809914 g2633 i0 54.4 1.77570093457944 103 47 96.3 0 9 317 70 172 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 570 117 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
27286423 27286423 PRJEB56699_P_NODE_463_length_854_cov_3.506667_g355_i0 PRJEB56699 463 854 3.506667 29.94693618 Tolivirales sp. 2809914 Viruses Viruses 387 1.85e-123   NR WRQ65272.1 2809914 g355 i0 65.8 0.997658079625293 284 97 99.8 0 2 853 515 798 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 852 387 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30381546 30381546 PRJEB56699_P_NODE_6553_length_156_cov_1.039370_g6323_i0 PRJEB56699 6553 156 1.03937 1.6214172 Tolivirales sp. 2809914 Viruses Viruses 89 5.78e-19   NR WRQ65630.1 2809914 g6323 i0 76.5 0.980769230769231 51 12 98.1 0 155 3 451 501 WRQ65630.1 polyprotein, partial [Tolivirales sp.] diamond 153 89 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30602160 30602160 PRJEB56699_P_NODE_413_length_895_cov_3.581986_g311_i0 PRJEB56699 413 895 3.581986 32.0587747 Tolivirales sp. 2809914 Viruses Viruses 198 2.71e-53   NR WRQ65272.1 2809914 g311 i0 59.4 0.569832402234637 170 61 54.3 1 16 501 861 1030 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 510 198 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
31582308 31582308 PRJEB56699_P_NODE_796_length_660_cov_2.717908_g641_i0 PRJEB56699 796 660 2.717908 17.9381928 Tolivirales sp. 2809914 Viruses Viruses 264 2.88e-78   NR WRQ65272.1 2809914 g641 i0 73.3 0.8 176 43 80 1 132 659 284 455 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 528 264 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;