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contig_metadata

14 rows where analysis = "diamond" and bioproject = "PRJEB56699"

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tax_superkingdom 3

tax_clade 3

bioproject 1

  • PRJEB56699 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2674664 2674664 PRJEB56699_P_NODE_2863_length_321_cov_3.061644_g2633_i0 PRJEB56699 2863 321 3.061644 9.82787724 Tolivirales sp. 2809914 Viruses Viruses 117 5.75e-28   NR WRQ65272.1 2809914 g2633 i0 54.4 1.77570093457944 103 47 96.3 0 9 317 70 172 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 570 117 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
26931915 26931915 PRJEB56699_P_NODE_2902_length_318_cov_13.660900_g2672_i0 PRJEB56699 2902 318 13.6609 43.441662 Saccharomycetaceae 4893 Fungi Fungi 63.2 7.63e-10   NR KAF4001137.1 4932 g2672 i0 54.5 3.09433962264151 66 20 62.3 1 4 201 51 106 KAF4001137.1 Protein TAR1 domain protein [Saccharomyces cerevisiae] diamond 984 63.5 0.995275590551181 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
27001715 27001715 PRJEB56699_P_NODE_5622_length_193_cov_2.189024_g5392_i0 PRJEB56699 5622 193 2.189024 4.22481632 Bufotes viridis 30338 Chordata Chordata 49.3 9.26e-5   NR CAK8629749.1 30338 g5392 i0 71.4 0.435233160621762 28 8 43.5 0 138 55 337 364 CAK8629749.1 Interleukin-1 receptor type 1 [Bufotes viridis] diamond 84 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
27001716 27001716 PRJEB56699_P_NODE_6662_length_151_cov_2.163934_g6432_i0 PRJEB56699 6662 151 2.163934 3.26754034 Rheinheimera sp. D18 2545632 Bacteria Bacteria 53.9 1.21e-6   NR WP_132584183.1 2545632 g6432 i0 55.6 0.894039735099338 45 20 89.4 0 138 4 438 482 WP_132584183.1 hypothetical protein [Rheinheimera sp. D18] diamond 135 53.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. D18
27286423 27286423 PRJEB56699_P_NODE_463_length_854_cov_3.506667_g355_i0 PRJEB56699 463 854 3.506667 29.94693618 Tolivirales sp. 2809914 Viruses Viruses 387 1.85e-123   NR WRQ65272.1 2809914 g355 i0 65.8 0.997658079625293 284 97 99.8 0 2 853 515 798 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 852 387 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
27374833 27374833 PRJEB56699_P_NODE_2663_length_337_cov_2.568182_g2433_i0 PRJEB56699 2663 337 2.568182 8.65477334 Luteovirus 12036 Viruses Viruses 63.9 4.03e-9   NR WKV33301.1 2585031 g2433 i0 43 2.65281899109792 79 42 68.5 2 327 97 156 233 WKV33301.1 MAG: RNA-dependent RNA polymerase, partial [Riboviria sp.] diamond 894 63.9 1 Viruses               Riboviria sp.
28423386 28423386 PRJEB56699_P_NODE_4866_length_214_cov_1.540541_g4636_i0 PRJEB56699 4866 214 1.540541 3.29675774 Niabella hibiscisoli 1825928 Bacteria Bacteria 42.4 0.0268   NR WP_240847907.1 1825928 g4636 i0 48.6 0.490654205607477 35 18 49.1 0 78 182 36 70 WP_240847907.1 J domain-containing protein [Niabella hibiscisoli] diamond 105 42.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Niabella Niabella hibiscisoli
28612684 28612684 PRJEB56699_P_NODE_287_length_1083_cov_4.704934_g177_i1 PRJEB56699 287 1083 4.704934 50.95443522 Shorea laevis 152420 Plants Plants 52.4 0.0016   NR GLT66639.1 152420 g177 i1 58.5 1 41 17 11.4 0 554 676 210 250 GLT66639.1 hypothetical protein SLA2020_389940 [Shorea laevis] diamond 1083 52.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Shorea Shorea laevis
28675932 28675932 PRJEB56699_P_NODE_1187_length_540_cov_3.070450_g1001_i0 PRJEB56699 1187 540 3.07045 16.58043 Changjiang tombus-like virus 8 1922822 Viruses Viruses 173 1.85e-49   NR YP_009337199.1 1922822 g1001 i0 55.7 0.877777777777778 158 70 87.8 0 6 479 187 344 YP_009337199.1 hypothetical protein 3 [Changjiang tombus-like virus 8] diamond 474 173 1 Viruses               Changjiang tombus-like virus 8
29086412 29086412 PRJEB56699_P_NODE_248_length_1159_cov_4.507080_g177_i0 PRJEB56699 248 1159 4.50708 52.2370572 Shorea laevis 152420 Plants Plants 52.4 0.00181   NR GLT66639.1 152420 g177 i0 58.5 0.934426229508197 41 17 10.6 0 614 492 210 250 GLT66639.1 hypothetical protein SLA2020_389940 [Shorea laevis] diamond 1083 52.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Shorea Shorea laevis
30381546 30381546 PRJEB56699_P_NODE_6553_length_156_cov_1.039370_g6323_i0 PRJEB56699 6553 156 1.03937 1.6214172 Tolivirales sp. 2809914 Viruses Viruses 89 5.78e-19   NR WRQ65630.1 2809914 g6323 i0 76.5 0.980769230769231 51 12 98.1 0 155 3 451 501 WRQ65630.1 polyprotein, partial [Tolivirales sp.] diamond 153 89 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30602160 30602160 PRJEB56699_P_NODE_413_length_895_cov_3.581986_g311_i0 PRJEB56699 413 895 3.581986 32.0587747 Tolivirales sp. 2809914 Viruses Viruses 198 2.71e-53   NR WRQ65272.1 2809914 g311 i0 59.4 0.569832402234637 170 61 54.3 1 16 501 861 1030 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 510 198 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30823479 30823479 PRJEB56699_P_NODE_4994_length_210_cov_2.138122_g4764_i0 PRJEB56699 4994 210 2.138122 4.4900562 Changjiang tombus-like virus 8 1922822 Viruses Viruses 79 2.54e-15   NR YP_009337199.1 1922822 g4764 i0 60.9 0.985714285714286 69 16 98.6 1 208 2 95 152 YP_009337199.1 hypothetical protein 3 [Changjiang tombus-like virus 8] diamond 207 79 1 Viruses               Changjiang tombus-like virus 8
31582308 31582308 PRJEB56699_P_NODE_796_length_660_cov_2.717908_g641_i0 PRJEB56699 796 660 2.717908 17.9381928 Tolivirales sp. 2809914 Viruses Viruses 264 2.88e-78   NR WRQ65272.1 2809914 g641 i0 73.3 0.8 176 43 80 1 132 659 284 455 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 528 264 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;