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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJEB56027" and tax_clade = "FCB group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 26 ✖

bioproject 1

  • PRJEB56027 · 26 ✖

analysis 1

  • diamond · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7776776 7776776 PRJEB56027_P_NODE_90227_length_282_cov_1.842105_g87418_i0 PRJEB56027 90227 282 1.842105 5.1947361 Chitinophagaceae bacterium LWZ2-11 3369651 Bacteria Bacteria 189 1.06e-57   NR MFL9484218.1 3369651 g87418 i0 100 0.98936170212766 93 0 98.9 0 3 281 170 262 MFL9484218.1 quinone oxidoreductase family protein [Chitinophagaceae bacterium LWZ2-11] diamond 279 189 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium LWZ2-11
10325361 10325361 PRJEB56027_P_NODE_114149_length_251_cov_0.865169_g111340_i0 PRJEB56027 114149 251 0.865169 2.17157419 Sphingobacterium sp. UT-1RO-CII-1 2995225 Bacteria Bacteria 162 3.58e-46   NR WP_268230074.1 2995225 g111340 i0 100 0.99203187250996006 83 0 99.2 0 251 3 272 354 WP_268230074.1 MFS transporter [Sphingobacterium sp. UT-1RO-CII-1] diamond 249 162 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium sp. UT-1RO-CII-1
12875600 12875600 PRJEB56027_P_NODE_103531_length_264_cov_1.345550_g100722_i0 PRJEB56027 103531 264 1.34555 3.552252 Rhodocytophaga rosea 2704465 Bacteria Bacteria 171 1.36e-49   NR WP_162444647.1 2704465 g100722 i0 96.6 0.988636363636364 87 3 98.9 0 2 262 158 244 WP_162444647.1 aminopeptidase P N-terminal domain-containing protein [Rhodocytophaga rosea] diamond 261 171 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Rhodocytophagaceae Rhodocytophaga Rhodocytophaga rosea
20523319 20523319 PRJEB56027_P_NODE_117477_length_249_cov_1.477273_g114668_i0 PRJEB56027 117477 249 1.477273 3.67840977 Flavobacterium sp. 239 Bacteria Bacteria 135 8.71e-35   NR MDI1254958.1 239 g114668 i0 86.7 2.97590361445783 83 10 98.8 1 2 247 307 389 MDI1254958.1 zinc-dependent metalloprotease family protein [Flavobacterium sp.] diamond 741 135 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
26685264 26685264 PRJEB56027_P_NODE_119781_length_248_cov_0.880000_g116972_i0 PRJEB56027 119781 248 0.88 2.1824 Bacteroidota bacterium 1898104 Bacteria Bacteria 145 2e-40   NR MEN9570738.1 1898104 g116972 i0 86.6 2.9758064516129 82 11 99.2 0 246 1 3 84 MEN9570738.1 hypothetical protein [Bacteroidota bacterium] diamond 738 145 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
26875662 26875662 PRJEB56027_P_NODE_114301_length_251_cov_0.865169_g111492_i0 PRJEB56027 114301 251 0.865169 2.17157419 Parabacteroides 375288 Bacteria Bacteria 96.3 7.879999999999999e-23   NR WP_122373075.1 375288 g111492 i0 85.4 1.14741035856574 48 7 57.4 0 249 106 132 179 WP_122373075.1 MULTISPECIES: flavodoxin family protein [Parabacteroides] diamond 288 96.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides  
27760476 27760476 PRJEB56027_P_NODE_123144_length_246_cov_1.433526_g120335_i0 PRJEB56027 123144 246 1.433526 3.52647396 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 56.2 6.69e-7   NR PYO90632.1 2026742 g120335 i0 44.4 0.98780487804878 81 42 95.1 2 246 13 152 232 PYO90632.1 MAG: hypothetical protein DMD66_01990 [Gemmatimonadota bacterium] diamond 243 56.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27981230 27981230 PRJEB56027_P_NODE_136485_length_231_cov_2.430380_g133676_i0 PRJEB56027 136485 231 2.43038 5.6141778 Riemerella sp. 2382126 Bacteria Bacteria 79.7 9.97e-17   NR RKW62188.1 2382126 g133676 i0 100 0.519480519480519 40 0 51.9 0 121 2 1 40 RKW62188.1 MAG: transcriptional repressor [Riemerella sp.] diamond 120 79.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Riemerella Riemerella sp.
28486393 28486393 PRJEB56027_P_NODE_107907_length_258_cov_1.664865_g105098_i0 PRJEB56027 107907 258 1.664865 4.2953517 Flavobacteriaceae bacterium 1871037 Bacteria Bacteria 176 4.9700000000000003e-51   NR HCO20130.1 1871037 g105098 i0 100 0.988372093023256 85 0 98.8 0 256 2 66 150 HCO20130.1 RagB/SusD family nutrient uptake outer membrane protein [Flavobacteriaceae bacterium] diamond 255 176 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
28763702 28763702 PRJEB56027_P_NODE_125927_length_245_cov_0.895349_g123118_i0 PRJEB56027 125927 245 0.895349 2.19360505 Odoribacteraceae 1853231 Bacteria Bacteria 149 1.09e-40   NR WP_013612163.1 28118 g123118 i0 87.7 4.93469387755102 81 10 99.2 0 243 1 6 86 WP_013612163.1 aspartate ammonia-lyase [Odoribacter splanchnicus] diamond 1209 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter Odoribacter splanchnicus
28865202 28865202 PRJEB56027_P_NODE_117328_length_249_cov_1.715909_g114519_i0 PRJEB56027 117328 249 1.715909 4.27261341 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 42.7 0.0396   NR MBT3341496.1 2026742 g114519 i0 66.7 0.289156626506024 24 8 28.9 0 19 90 139 162 MBT3341496.1 hypothetical protein [Gemmatimonadota bacterium] diamond 72 42.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29174381 29174381 PRJEB56027_P_NODE_120729_length_247_cov_2.488506_g117920_i0 PRJEB56027 120729 247 2.488506 6.14660982 Porphyromonas 836 Bacteria Bacteria 115 3.28e-28   NR WP_289121340.1 159274 g117920 i0 98.3 1.4331983805668 59 1 71.7 0 2 178 391 449 WP_289121340.1 YihY/virulence factor BrkB family protein [uncultured Porphyromonas sp.] diamond 354 115 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas uncultured Porphyromonas sp.
29363792 29363792 PRJEB56027_P_NODE_103209_length_264_cov_2.026178_g100400_i0 PRJEB56027 103209 264 2.026178 5.34910992 Kaistella 2782231 Bacteria Bacteria 72.4 1.93e-13   NR WP_039350131.1 266749 g100400 i0 47 3.68181818181818 83 38 92 2 261 19 1 79 WP_039350131.1 hypothetical protein [Kaistella jeonii] diamond 972 72.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Kaistella Kaistella jeonii
29464757 29464757 PRJEB56027_P_NODE_107170_length_259_cov_1.634409_g104361_i0 PRJEB56027 107170 259 1.634409 4.23311931 Cloacibacterium caeni 2004710 Bacteria Bacteria 159 2.24e-48   NR MFN3270937.1 2004710 g104361 i0 98.8 0.984555984555985 85 1 98.5 0 5 259 1 85 MFN3270937.1 type II toxin-antitoxin system VapC family toxin [Cloacibacterium caeni] diamond 255 159 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium caeni
29615945 29615945 PRJEB56027_P_NODE_112110_length_253_cov_1.477778_g109301_i0 PRJEB56027 112110 253 1.477778 3.73877834 root 1 Root_unresolved Root_unresolved 167 2.87e-46   NR WP_294627524.1 162156 g109301 i0 88.1 12.9486166007905 84 10 99.6 0 253 2 417 500 WP_294627524.1 alpha-galactosidase [uncultured Bacteroides sp.] diamond 3276 168 0.994047619047619 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides uncultured Bacteroides sp.
29774014 29774014 PRJEB56027_P_NODE_103591_length_264_cov_1.225131_g100782_i0 PRJEB56027 103591 264 1.225131 3.23434584 Roseisolibacter 2093335 Bacteria Bacteria 134 7.31e-36   NR WP_284351890.1 2014610 g100782 i0 71.3 3.95454545454545 87 25 98.9 0 3 263 251 337 WP_284351890.1 radical SAM family heme chaperone HemW [Roseisolibacter agri] diamond 1044 135 0.992592592592593 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Roseisolibacter Roseisolibacter agri
30065054 30065054 PRJEB56027_P_NODE_137612_length_227_cov_2.487013_g134803_i0 PRJEB56027 137612 227 2.487013 5.64551951 Porphyromonas sp. 1924944 Bacteria Bacteria 109 4.01e-28   NR MFC2630513.1 1924944 g134803 i0 100 1.40088105726872 53 0 70 0 2 160 72 124 MFC2630513.1 transporter associated domain-containing protein [Porphyromonas sp.] diamond 318 109 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas sp.
30350095 30350095 PRJEB56027_P_NODE_89872_length_283_cov_1.276190_g87063_i0 PRJEB56027 89872 283 1.27619 3.6116177 Bacteroidota bacterium 1898104 Bacteria Bacteria 70.1 1.51e-11   NR RMG81238.1 1898104 g87063 i0 57.4 2.97879858657244 61 26 64.7 0 1 183 370 430 RMG81238.1 MAG: choice-of-anchor D domain-containing protein, partial [Bacteroidota bacterium] diamond 843 70.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30690235 30690235 PRJEB56027_P_NODE_128033_length_244_cov_0.900585_g125224_i0 PRJEB56027 128033 244 0.900585 2.1974274 Sphingobacterium 28453 Bacteria Bacteria 165 5.29e-47   NR WP_345068939.1 768534 g125224 i0 100 1.99180327868852 81 0 99.6 0 1 243 160 240 WP_345068939.1 UDP-N-acetylmuramate--L-alanine ligase [Sphingobacterium thermophilum] diamond 486 165 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium thermophilum
30974819 30974819 PRJEB56027_P_NODE_112694_length_252_cov_1.804469_g109885_i0 PRJEB56027 112694 252 1.804469 4.54726188 Chitinophagaceae 563835 Bacteria Bacteria 96.7 3.36e-21   NR HXS37735.1 2307286 g109885 i0 92 2.97619047619048 50 4 59.5 0 252 103 421 470 HXS37735.1 RNA polymerase factor sigma-54 [Flavipsychrobacter sp.] diamond 750 97.4 0.992813141683778 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavipsychrobacter Flavipsychrobacter sp.
31170782 31170782 PRJEB56027_P_NODE_118155_length_249_cov_0.875000_g115346_i0 PRJEB56027 118155 249 0.875 2.17875 Bacteroides sp. 29523 Bacteria Bacteria 138 7.44e-38   NR MCI1647371.1 29523 g115346 i0 73.5 3 83 22 100 0 1 249 47 129 MCI1647371.1 endonuclease/exonuclease/phosphatase family protein [Bacteroides sp.] diamond 747 138 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides sp.
32088313 32088313 PRJEB56027_P_NODE_92178_length_279_cov_2.932039_g89369_i0 PRJEB56027 92178 279 2.932039 8.18038881 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 102 1.6500000000000002e-26   NR HEX8904273.1 3047548 g89369 i0 76.9 0.698924731182796 65 15 69.9 0 3 197 10 74 HEX8904273.1 LysR substrate-binding domain-containing protein [Longimicrobiaceae bacterium] diamond 195 102 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
32088314 32088314 PRJEB56027_P_NODE_92618_length_279_cov_1.349515_g89809_i0 PRJEB56027 92618 279 1.349515 3.76514685 Segetibacter sp. 3557_3 2547429 Bacteria Bacteria 43.9 0.0182   NR WP_133267458.1 2547429 g89809 i0 38.3 0.645161290322581 60 35 63.4 2 247 71 47 105 WP_133267458.1 sulfite exporter TauE/SafE family protein [Segetibacter sp. 3557_3] diamond 180 43.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Segetibacter Segetibacter sp. 3557_3
32468290 32468290 PRJEB56027_P_NODE_114599_length_251_cov_0.865169_g111790_i0 PRJEB56027 114599 251 0.865169 2.17157419 Sphingobacterium cavernae 2592657 Bacteria Bacteria 47.8 4.6e-5   NR WP_149912844.1 2592657 g111790 i0 100 0.274900398406374 23 0 27.5 0 182 250 1 23 WP_149912844.1 hypothetical protein [Sphingobacterium cavernae] diamond 69 47.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium cavernae
32468291 32468291 PRJEB56027_P_NODE_128419_length_243_cov_1.811765_g125610_i0 PRJEB56027 128419 243 1.811765 4.40258895 Ginsengibacter sp. 2806034 Bacteria Bacteria 46.6 0.00113   NR MEO7121255.1 2806034 g125610 i0 34.6 0.962962962962963 78 50 95.1 1 235 5 42 119 MEO7121255.1 hypothetical protein [Ginsengibacter sp.] diamond 234 46.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ginsengibacter Ginsengibacter sp.
32499873 32499873 PRJEB56027_P_NODE_122659_length_246_cov_2.260116_g119850_i0 PRJEB56027 122659 246 2.260116 5.55988536 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 82.4 4.37e-16   NR MBL7743379.1 1869212 g119850 i0 56 1.02439024390244 84 34 98.8 2 243 1 1067 1150 MBL7743379.1 heparin lyase I family protein [Chitinophagaceae bacterium] diamond 252 82.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;