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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJEB55250" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJEB55250 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15424140 15424140 PRJEB55250_P_NODE_15873_length_242_cov_1.473373_g15749_i0 PRJEB55250 15873 242 1.473373 3.56556266 Polyangiaceae bacterium 2268199 Bacteria Bacteria 125 2.26e-33   NR MCU0682396.1 2268199 g15749 i0 79 1.00413223140496 81 16 99.2 1 242 3 31 111 MCU0682396.1 hypothetical protein [Polyangiaceae bacterium] diamond 243 125 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
24347505 24347505 PRJEB55250_P_NODE_11500_length_251_cov_1.443820_g11376_i0 PRJEB55250 11500 251 1.44382 3.6239882 Myxococcaceae 31 Bacteria Bacteria 132 4.18e-37   NR WP_301540719.1 83462 g11376 i0 78.3 14.8804780876494 83 18 99.2 0 2 250 46 128 WP_301540719.1 glycoside hydrolase family 19 protein, partial [Corallococcus exiguus] diamond 3735 132 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus exiguus
26685253 26685253 PRJEB55250_P_NODE_4141_length_338_cov_2.116981_g4017_i0 PRJEB55250 4141 338 2.116981 7.15539578 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 129 1.85e-32   NR MBM3298794.1 2026735 g4017 i0 84.4 0.683431952662722 77 12 68.3 0 336 106 504 580 MBM3298794.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 231 129 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27159707 27159707 PRJEB55250_P_NODE_16462_length_241_cov_0.916667_g16338_i0 PRJEB55250 16462 241 0.916667 2.20916747 Myxococcales bacterium 2026763 Bacteria Bacteria 111 1.8e-26   NR MFT3924803.1 2026763 g16338 i0 71.6 1.00829875518672 81 22 99.6 1 241 2 468 548 MFT3924803.1 AMP-dependent synthetase/ligase [Myxococcales bacterium] diamond 243 111 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27627267 27627267 PRJEB55250_P_NODE_9304_length_266_cov_2.129534_g9180_i0 PRJEB55250 9304 266 2.129534 5.66456044 Bacteria 2 Bacteria Bacteria 147 6.279999999999998e-43   NR MDP3501937.1 2026763 g9180 i0 76.1 6.91353383458647 88 21 99.2 0 264 1 44 131 MDP3501937.1 glycoside hydrolase family 19 protein [Myxococcales bacterium] diamond 1839 148 0.993243243243243 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28675928 28675928 PRJEB55250_P_NODE_8407_length_273_cov_1.540000_g8283_i0 PRJEB55250 8407 273 1.54 4.2042 Polyangiaceae bacterium 2268199 Bacteria Bacteria 109 8.57e-27   NR MFO0639718.1 2268199 g8283 i0 61.1 0.989010989010989 90 35 98.9 0 270 1 137 226 MFO0639718.1 hypothetical protein [Polyangiaceae bacterium] diamond 270 109 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30128084 30128084 PRJEB55250_P_NODE_8772_length_270_cov_1.862944_g8648_i0 PRJEB55250 8772 270 1.862944 5.0299488 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.5 0.0277   NR MCD6297440.1 2026735 g8648 i0 36.6 0.788888888888889 71 40 74.4 3 10 210 356 425 MCD6297440.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 213 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30981638 30981638 PRJEB55250_P_NODE_2194_length_440_cov_2.098093_g2071_i0 PRJEB55250 2194 440 2.098093 9.2316092 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 133 2.67e-33   NR MBM3298794.1 2026735 g2071 i0 47.9 0.995454545454545 146 76 99.5 0 438 1 59 204 MBM3298794.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 438 133 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31582305 31582305 PRJEB55250_P_NODE_9916_length_262_cov_1.465608_g9792_i0 PRJEB55250 9916 262 1.465608 3.83989296 Myxococcales bacterium 2026763 Bacteria Bacteria 129 3.0599999999999993e-34   NR MBL8605782.1 2026763 g9792 i0 73.8 0.961832061068702 84 22 96.2 0 261 10 61 144 MBL8605782.1 hypothetical protein [Myxococcales bacterium] diamond 252 129 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31930028 31930028 PRJEB55250_P_NODE_13337_length_247_cov_1.770115_g13213_i0 PRJEB55250 13337 247 1.770115 4.37218405 Myxococcales bacterium 2026763 Bacteria Bacteria 72.4 3.73e-13   NR MCA9708461.1 2026763 g13213 i0 49.3 0.838056680161943 69 35 83.8 0 243 37 21 89 MCA9708461.1 hypothetical protein [Myxococcales bacterium] diamond 207 72.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32056651 32056651 PRJEB55250_P_NODE_9858_length_262_cov_1.629630_g9734_i0 PRJEB55250 9858 262 1.62963 4.2696306 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42.4 0.031   NR MBW1839473.1 2026735 g9734 i0 31.7 0.687022900763359 60 40 67.6 1 59 235 35 94 MBW1839473.1 DUF3473 domain-containing protein [Deltaproteobacteria bacterium] diamond 180 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32214975 32214975 PRJEB55250_P_NODE_17318_length_209_cov_4.257353_g17194_i0 PRJEB55250 17318 209 4.257353 8.89786777 Polyangiaceae bacterium 2268199 Bacteria Bacteria 62.4 2.78e-9   NR HEY3499757.1 2268199 g17194 i0 38.2 0.976076555023923 68 42 97.6 0 3 206 70 137 HEY3499757.1 BNR-4 repeat-containing protein [Polyangiaceae bacterium] diamond 204 62.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32461361 32461361 PRJEB55250_P_NODE_8859_length_270_cov_1.172589_g8735_i0 PRJEB55250 8859 270 1.172589 3.1659903 Bacteria 2 Bacteria Bacteria 43.5 0.0271   NR RYZ06166.1 2026763 g8735 i0 55 1 40 15 44.4 1 194 75 4 40 RYZ06166.1 MAG: hypothetical protein EOO73_17320 [Myxococcales bacterium] diamond 270 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32468284 32468284 PRJEB55250_P_NODE_3579_length_357_cov_1.901408_g3455_i0 PRJEB55250 3579 357 1.901408 6.78802656 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.1 0.0209   NR MBK8234610.1 2026735 g3455 i0 30.1 0.865546218487395 103 68 86.6 1 322 14 490 588 MBK8234610.1 HEAT repeat domain-containing protein [Deltaproteobacteria bacterium] diamond 309 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;