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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJEB55122" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB55122 · 30 ✖

analysis 1

  • diamond · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
120667 120667 PRJEB55122_P_NODE_20161_length_247_cov_1.050505_g19764_i0 PRJEB55122 20161 247 1.050505 2.59474735 Hordeum vulgare subsp. vulgare 112509 Plants Plants 98.2 3.0899999999999993e-24   NR BAK01039.1 112509 g19764 i0 80.3 0.740890688259109 61 12 74.1 0 245 63 53 113 BAK01039.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 183 98.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
4819717 4819717 PRJEB55122_P_NODE_29884_length_192_cov_1.454545_g29487_i0 PRJEB55122 29884 192 1.454545 2.7927264 Quercus rubra 3512 Plants Plants 99 1.87e-24   NR KAK4594626.1 3512 g29487 i0 77.8 0.984375 63 14 98.4 0 189 1 84 146 KAK4594626.1 hypothetical protein RGQ29_018347 [Quercus rubra] diamond 189 99 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
5223425 5223425 PRJEB55122_P_NODE_28645_length_197_cov_1.520270_g28248_i0 PRJEB55122 28645 197 1.52027 2.9949319 Hordeum vulgare subsp. vulgare 112509 Plants Plants 128 2.06e-35   NR BAJ97069.1 112509 g28248 i0 96.9 0.989847715736041 65 2 99 0 196 2 134 198 BAJ97069.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 195 128 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
7773297 7773297 PRJEB55122_P_NODE_26207_length_208_cov_2.823899_g25810_i0 PRJEB55122 26207 208 2.823899 5.87370992 Hordeum vulgare subsp. vulgare 112509 Plants Plants 74.3 1.7e-13   NR BAK02651.1 112509 g25810 i0 69 1.02403846153846 71 14 98.1 5 206 3 16 81 BAK02651.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 213 74.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
10323650 10323650 PRJEB55122_P_NODE_20389_length_245_cov_1.326531_g19992_i0 PRJEB55122 20389 245 1.326531 3.25000095 Hordeum vulgare subsp. vulgare 112509 Plants Plants 148 1.91e-40   NR BAJ93616.1 112509 g19992 i0 90.1 0.991836734693878 81 6 99.2 1 3 245 358 436 BAJ93616.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 243 148 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
23073554 23073554 PRJEB55122_P_NODE_79_length_3270_cov_7.482148_g64_i0 PRJEB55122 79 3270 7.482148 244.6662396 Hordeum vulgare subsp. vulgare 112509 Plants Plants 1280 0   NR BAK02651.1 112509 g64 i0 67.1 0.995412844036697 1085 266 94.8 26 3268 170 400 1445 BAK02651.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 3255 1280 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
24347398 24347398 PRJEB55122_P_NODE_80_length_3265_cov_5.466418_g64_i1 PRJEB55122 80 3265 5.466418 178.4785477 Hordeum vulgare subsp. vulgare 112509 Plants Plants 1276 0   NR BAK02651.1 112509 g64 i1 65.1 1.00428790199081 1093 267 94.2 31 3263 189 400 1445 BAK02651.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 3279 1276 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
24347410 24347410 PRJEB55122_P_NODE_8400_length_460_cov_1.625304_g8006_i0 PRJEB55122 8400 460 1.625304 7.4763984 Hordeum vulgare subsp. vulgare 112509 Plants Plants 245 1.26e-76   NR BAJ93616.1 112509 g8006 i0 89.3 0.978260869565217 150 12 96.5 2 2 445 316 463 BAJ93616.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 450 245 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
26590084 26590084 PRJEB55122_P_NODE_9441_length_423_cov_3.593583_g9047_i0 PRJEB55122 9441 423 3.593583 15.20085609 Hordeum vulgare subsp. vulgare 112509 Plants Plants 224 2.9e-73   NR BAJ99430.1 112509 g9047 i0 94.9 0.836879432624113 118 6 83.7 0 374 21 1 118 BAJ99430.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 354 224 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
26748222 26748222 PRJEB55122_P_NODE_10241_length_399_cov_1.965714_g9847_i0 PRJEB55122 10241 399 1.965714 7.84319886 Hordeum vulgare subsp. vulgare 112509 Plants Plants 189 2.54e-59   NR BAJ95967.1 112509 g9847 i0 96.1 1.53383458646617 102 4 76.7 0 308 3 1 102 BAJ95967.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 612 189 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
26938488 26938488 PRJEB55122_P_NODE_39222_length_166_cov_1.367521_g38825_i0 PRJEB55122 39222 166 1.367521 2.27008486 Physcomitrium patens 3218 Plants Plants 42 0.0246   NR XP_024376662.1 3218 g38825 i0 31.7 0.740963855421687 41 28 74.1 0 37 159 91 131 XP_024376662.1 uncharacterized GPI-anchored protein At1g61900-like [Physcomitrium patens] diamond 123 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
27791817 27791817 PRJEB55122_P_NODE_34664_length_175_cov_1.301587_g34267_i0 PRJEB55122 34664 175 1.301587 2.27777725 Oryza sativa Indica Group 39946 Plants Plants 43.5 0.00125   NR EAZ09485.1 39946 g34267 i0 87.5 0.411428571428571 24 3 41.1 0 1 72 45 68 EAZ09485.1 hypothetical protein OsI_31757 [Oryza sativa Indica Group] diamond 72 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
28359883 28359883 PRJEB55122_P_NODE_39066_length_166_cov_2.153846_g38669_i0 PRJEB55122 39066 166 2.153846 3.57538436 Ricinus communis 3988 Plants Plants 65.9 3.11e-12   NR EEF34889.1 3988 g38669 i0 61.1 0.975903614457831 54 21 97.6 0 162 1 44 97 EEF34889.1 conserved hypothetical protein [Ricinus communis] diamond 162 65.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Ricinus Ricinus communis
28896687 28896687 PRJEB55122_P_NODE_22908_length_227_cov_1.168539_g22511_i0 PRJEB55122 22908 227 1.168539 2.65258353 Hordeum vulgare subsp. vulgare 112509 Plants Plants 112 6.49e-30   NR BAJ99430.1 112509 g22511 i0 91.4 0.766519823788546 58 5 76.7 0 53 226 1 58 BAJ99430.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 174 112 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28896691 28896691 PRJEB55122_P_NODE_36128_length_170_cov_1.553719_g35731_i0 PRJEB55122 36128 170 1.553719 2.6413223 Alnus glutinosa 3517 Plants Plants 46.2 8.35e-4   NR XP_062148815.1 3517 g35731 i0 75 0.494117647058824 28 7 49.4 0 86 169 3 30 XP_062148815.1 glycine-rich cell wall structural protein 1.8-like [Alnus glutinosa] diamond 84 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Alnus Alnus glutinosa
29023463 29023463 PRJEB55122_P_NODE_16528_length_282_cov_1.540773_g16131_i0 PRJEB55122 16528 282 1.540773 4.34497986 Hordeum vulgare subsp. vulgare 112509 Plants Plants 147 2.19e-43   NR BAJ95967.1 112509 g16131 i0 92.5 0.851063829787234 80 6 85.1 0 1 240 48 127 BAJ95967.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 240 147 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
29307209 29307209 PRJEB55122_P_NODE_37329_length_168_cov_1.689076_g36932_i0 PRJEB55122 37329 168 1.689076 2.83764768 Eleusine coracana subsp. coracana 191504 Plants Plants 41.6 0.0243   NR GJM92826.1 191504 g36932 i0 47.4 0.678571428571429 38 17 67.9 1 19 132 125 159 GJM92826.1 hypothetical protein PR202_ga09330 [Eleusine coracana subsp. coracana] diamond 114 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Eleusine Eleusine coracana
29464742 29464742 PRJEB55122_P_NODE_37990_length_168_cov_0.873950_g37593_i0 PRJEB55122 37990 168 0.87395 1.468236 Brachypodium distachyon 15368 Plants Plants 82.4 1.37e-16   NR XP_010239124.1 15368 g37593 i0 80.9 5.66071428571429 47 8 83.9 1 166 26 383 428 XP_010239124.1 ATP-dependent DNA helicase PIF1-like [Brachypodium distachyon] diamond 951 82.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachypodium Brachypodium distachyon
29622538 29622538 PRJEB55122_P_NODE_15970_length_289_cov_0.900000_g15573_i0 PRJEB55122 15970 289 0.9 2.601 Hordeum vulgare subsp. vulgare 112509 Plants Plants 73.9 5.84e-13   NR BAJ93291.1 112509 g15573 i0 44 1.03806228373702 100 50 98.6 3 4 288 259 357 BAJ93291.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 300 73.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
30089887 30089887 PRJEB55122_P_NODE_37232_length_168_cov_2.184874_g36835_i0 PRJEB55122 37232 168 2.184874 3.67058832 Eukaryota 2759 Plants Plants 54.7 2.02e-7   NR KAB8115700.1 4530 g36835 i0 48.2 6.91071428571429 56 28 98.2 1 167 3 62 117 KAB8115700.1 hypothetical protein EE612_056371 [Oryza sativa] diamond 1161 55.1 0.992740471869329 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
30191437 30191437 PRJEB55122_P_NODE_11632_length_365_cov_1.316456_g11235_i0 PRJEB55122 11632 365 1.316456 4.8050644 Vigna angularis 3914 Plants Plants 74.7 5.9e-13   NR XP_017434820.2 3914 g11235 i0 50 1.08493150684932 66 33 54.2 0 106 303 174 239 XP_017434820.2 zingipain-2 [Vigna angularis] diamond 396 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna angularis
30823455 30823455 PRJEB55122_P_NODE_17074_length_276_cov_1.370044_g16677_i0 PRJEB55122 17074 276 1.370044 3.78132144 Dendrobium catenatum 906689 Plants Plants 42 0.0477   NR PKU82430.1 906689 g16677 i0 42.3 0.565217391304348 52 28 54.3 1 124 273 45 96 PKU82430.1 hypothetical protein MA16_Dca005435 [Dendrobium catenatum] diamond 156 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Dendrobium Dendrobium catenatum
30949993 30949993 PRJEB55122_P_NODE_15814_length_291_cov_1.289256_g15417_i0 PRJEB55122 15814 291 1.289256 3.75173496 Hordeum vulgare subsp. vulgare 112509 Plants Plants 190 2.95e-56   NR BAJ93616.1 112509 g15417 i0 97.9 1.97938144329897 96 2 99 0 3 290 57 152 BAJ93616.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 576 190 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
31866649 31866649 PRJEB55122_P_NODE_26077_length_209_cov_1.418750_g25680_i0 PRJEB55122 26077 209 1.41875 2.9651875 Hordeum vulgare subsp. vulgare 112509 Plants Plants 102 1.1e-25   NR BAJ93879.1 112509 g25680 i0 94.2 0.746411483253589 52 3 74.6 0 2 157 125 176 BAJ93879.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 156 102 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
32246858 32246858 PRJEB55122_P_NODE_20718_length_242_cov_2.611399_g20321_i0 PRJEB55122 20718 242 2.611399 6.31958558 Hordeum vulgare subsp. vulgare 112509 Plants Plants 155 6.989999999999999e-46   NR BAJ97069.1 112509 g20321 i0 97.5 0.991735537190083 80 2 99.2 0 3 242 5 84 BAJ97069.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 240 155 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
32404818 32404818 PRJEB55122_P_NODE_41419_length_164_cov_0.904348_g41022_i0 PRJEB55122 41419 164 0.904348 1.48313072 Picea glauca 3330 Plants Plants 50.4 8.27e-6   NR KUM47898.1 3330 g41022 i0 100 0.402439024390244 22 0 40.2 0 33 98 85 106 KUM47898.1 hypothetical protein ABT39_MTgene4893 [Picea glauca] diamond 66 50.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea glauca
32594554 32594554 PRJEB55122_P_NODE_40620_length_165_cov_0.896552_g40223_i0 PRJEB55122 40620 165 0.896552 1.4793108 Citrus x changshan-huyou 2935761 Plants Plants 65.5 1.6e-12   NR KAK9208684.1 2935761 g40223 i0 86.5 2.01818181818182 37 5 67.3 0 164 54 26 62 KAK9208684.1 hypothetical protein WN944_001044 [Citrus x changshan-huyou] diamond 333 65.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus x changshan-huyou
32625798 32625798 PRJEB55122_P_NODE_37880_length_168_cov_0.873950_g37483_i0 PRJEB55122 37880 168 0.87395 1.468236 Parasponia andersonii 3476 Plants Plants 42.4 0.0185   NR PON72506.1 3476 g37483 i0 50 0.714285714285714 40 18 69.6 2 20 136 280 318 PON72506.1 S-receptor-like serine/threonine-protein kinase [Parasponia andersonii] diamond 120 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
32657070 32657070 PRJEB55122_P_NODE_33440_length_179_cov_1.600000_g33043_i0 PRJEB55122 33440 179 1.6 2.864 Castanea dentata 134033 Plants Plants 64.3 1.08e-11   NR KAL4621532.1 134033 g33043 i0 73.2 0.687150837988827 41 11 68.7 0 123 1 1 41 KAL4621532.1 hypothetical protein ACB092_06G235200 [Castanea dentata] diamond 123 64.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Castanea Castanea dentata
32751861 32751861 PRJEB55122_P_NODE_21080_length_240_cov_1.089005_g20683_i0 PRJEB55122 21080 240 1.089005 2.613612 Hordeum vulgare subsp. vulgare 112509 Plants Plants 150 1.76e-44   NR BAK02811.1 112509 g20683 i0 100 0.9125 73 0 91.3 0 21 239 1 73 BAK02811.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 219 150 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;