contig_metadata
50 rows where analysis = "diamond", bioproject = "PRJEB55122" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 991772 | 991772 | PRJEB55122_P_NODE_17821_length_268_cov_1.424658_g17424_i0 | PRJEB55122 | 17821 | 268 | 1.424658 | 3.81808344 | Litchfieldella anticariensis | 258591 | Bacteria | Bacteria | 53.9 | 5.41e-6 | NR | WP_016418841.1 | 258591 | g17424 | i0 | 78.6 | 2.65298507462687 | 28 | 6 | 31.3 | 0 | 85 | 2 | 288 | 315 | WP_016418841.1 polysaccharide deacetylase family protein [Litchfieldella anticariensis] | diamond | 711 | 53.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Litchfieldella | Litchfieldella anticariensis | ||
| 2267034 | 2267034 | PRJEB55122_P_NODE_43782_length_162_cov_0.920354_g43385_i0 | PRJEB55122 | 43782 | 162 | 0.920354 | 1.49097348 | Limnohabitans sp. | 1907725 | Bacteria | Bacteria | 94.4 | 6.95e-22 | NR | TXI63681.1 | 1907725 | g43385 | i0 | 84.9 | 0.981481481481482 | 53 | 8 | 98.1 | 0 | 161 | 3 | 35 | 87 | TXI63681.1 MAG: ABC transporter ATP-binding protein [Limnohabitans sp.] | diamond | 159 | 94.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Limnohabitans | Limnohabitans sp. | ||
| 14149702 | 14149702 | PRJEB55122_P_NODE_43272_length_162_cov_0.920354_g42875_i0 | PRJEB55122 | 43272 | 162 | 0.920354 | 1.49097348 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 100 | 3.93e-26 | NR | WP_294060054.1 | 28214 | g42875 | i0 | 86.8 | 1.96296296296296 | 53 | 7 | 98.1 | 0 | 161 | 3 | 2 | 54 | WP_294060054.1 hypothetical protein [Sphingomonas sp.] | diamond | 318 | 100 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 15019614 | 15019614 | PRJEB55122_P_NODE_38432_length_167_cov_0.881356_g38035_i0 | PRJEB55122 | 38432 | 167 | 0.881356 | 1.47186452 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 105 | 4.11e-25 | NR | HWP18580.1 | 2030806 | g38035 | i0 | 98.2 | 0.988023952095808 | 55 | 1 | 98.8 | 0 | 2 | 166 | 334 | 388 | HWP18580.1 PLP-dependent aminotransferase family protein [Burkholderiaceae bacterium] | diamond | 165 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium | |||
| 25217869 | 25217869 | PRJEB55122_P_NODE_37700_length_168_cov_0.873950_g37303_i0 | PRJEB55122 | 37700 | 168 | 0.87395 | 1.468236 | Modicisalibacter sp. | 2944774 | Bacteria | Bacteria | 85.1 | 1.14e-17 | NR | HET8790522.1 | 2944774 | g37303 | i0 | 78.2 | 1.96428571428571 | 55 | 12 | 98.2 | 0 | 2 | 166 | 162 | 216 | HET8790522.1 ATP phosphoribosyltransferase regulatory subunit [Modicisalibacter sp.] | diamond | 330 | 85.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Modicisalibacter | Modicisalibacter sp. | ||
| 26748229 | 26748229 | PRJEB55122_P_NODE_41041_length_164_cov_1.600000_g40644_i0 | PRJEB55122 | 41041 | 164 | 1.6 | 2.624 | Altererythrobacter lauratis | 2054627 | Bacteria | Bacteria | 108 | 2.84e-26 | NR | WP_336920513.1 | 2054627 | g40644 | i0 | 100 | 0.98780487804878 | 54 | 0 | 98.8 | 0 | 1 | 162 | 285 | 338 | WP_336920513.1 hypothetical protein [Altererythrobacter lauratis] | diamond | 162 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Alteraurantiacibacter | Alteraurantiacibacter lauratis | ||
| 26994904 | 26994904 | PRJEB55122_P_NODE_41242_length_164_cov_0.904348_g40845_i0 | PRJEB55122 | 41242 | 164 | 0.904348 | 1.48313072 | Pseudomonas | 286 | Bacteria | Bacteria | 95.9 | 1.53e-23 | NR | WP_008083529.1 | 196821 | g40845 | i0 | 83.3 | 2.96341463414634 | 54 | 9 | 98.8 | 0 | 163 | 2 | 95 | 148 | WP_008083529.1 MULTISPECIES: tellurite resistance TerB family protein [unclassified Pseudomonas] | diamond | 486 | 95.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | |||
| 27065092 | 27065092 | PRJEB55122_P_NODE_39042_length_166_cov_2.444444_g38645_i0 | PRJEB55122 | 39042 | 166 | 2.444444 | 4.05777704 | Ferrovum sp. | 2609467 | Bacteria | Bacteria | 60.5 | 7.13e-9 | NR | WP_298128389.1 | 2609467 | g38645 | i0 | 78.8 | 0.596385542168675 | 33 | 7 | 59.6 | 0 | 100 | 2 | 1 | 33 | WP_298128389.1 glycosyltransferase [Ferrovum sp.] | diamond | 99 | 60.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Ferrovales | Ferrovaceae | Ferrovum | Ferrovum sp. | ||
| 27096730 | 27096730 | PRJEB55122_P_NODE_15902_length_289_cov_3.016667_g15505_i0 | PRJEB55122 | 15902 | 289 | 3.016667 | 8.71816763 | Bradyrhizobium lablabi | 722472 | Bacteria | Bacteria | 43.1 | 0.0466 | NR | WP_212225785.1 | 722472 | g15505 | i0 | 44.7 | 0.487889273356401 | 47 | 25 | 47.8 | 1 | 123 | 260 | 234 | 280 | WP_212225785.1 FG-GAP-like repeat-containing protein [Bradyrhizobium lablabi] | diamond | 141 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium lablabi | ||
| 27096740 | 27096740 | PRJEB55122_P_NODE_39842_length_166_cov_0.888889_g39445_i0 | PRJEB55122 | 39842 | 166 | 0.888889 | 1.47555574 | Sphingomonas psychrotolerans | 1327635 | Bacteria | Bacteria | 99.4 | 6.8e-23 | NR | WP_100282152.1 | 1327635 | g39445 | i0 | 83 | 1.91566265060241 | 53 | 9 | 95.8 | 0 | 161 | 3 | 138 | 190 | WP_100282152.1 esterase-like activity of phytase family protein [Sphingomonas psychrotolerans] | diamond | 318 | 99.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas psychrotolerans | ||
| 27286409 | 27286409 | PRJEB55122_P_NODE_33763_length_178_cov_1.387597_g33366_i0 | PRJEB55122 | 33763 | 178 | 1.387597 | 2.46992266 | Roseateles sp. | 1971397 | Bacteria | Bacteria | 103 | 2.04e-27 | NR | WP_373717183.1 | 1971397 | g33366 | i0 | 98 | 0.842696629213483 | 50 | 1 | 84.3 | 0 | 27 | 176 | 1 | 50 | WP_373717183.1 hypothetical protein [Roseateles sp.] | diamond | 150 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. | ||
| 27343137 | 27343137 | PRJEB55122_P_NODE_26783_length_206_cov_0.980892_g26386_i0 | PRJEB55122 | 26783 | 206 | 0.980892 | 2.02063752 | root | 1 | Root_unresolved | Root_unresolved | 139 | 6.87e-38 | NR | WP_206601589.1 | 562 | g26386 | i0 | 100 | 1500.55339805825 | 68 | 0 | 99 | 0 | 204 | 1 | 93 | 160 | WP_206601589.1 actin, partial [Escherichia coli] | diamond | 309114 | 139 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27507731 | 27507731 | PRJEB55122_P_NODE_30483_length_190_cov_1.326241_g30086_i0 | PRJEB55122 | 30483 | 190 | 1.326241 | 2.5198579 | Roseateles sp. | 1971397 | Bacteria | Bacteria | 112 | 1.69e-30 | NR | MEE8614394.1 | 1971397 | g30086 | i0 | 100 | 1.61052631578947 | 51 | 0 | 80.5 | 0 | 154 | 2 | 1 | 51 | MEE8614394.1 PEP-CTERM/exosortase system-associated acyltransferase [Roseateles sp.] | diamond | 306 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. | ||
| 27665601 | 27665601 | PRJEB55122_P_NODE_43024_length_162_cov_1.637168_g42627_i0 | PRJEB55122 | 43024 | 162 | 1.637168 | 2.65221216 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 87.8 | 3.59e-20 | NR | WP_294060577.1 | 28214 | g42627 | i0 | 77.8 | 1 | 54 | 12 | 100 | 0 | 1 | 162 | 16 | 69 | WP_294060577.1 GNAT family N-acetyltransferase [Sphingomonas sp.] | diamond | 162 | 87.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 27854828 | 27854828 | PRJEB55122_P_NODE_36405_length_169_cov_1.716667_g36008_i0 | PRJEB55122 | 36405 | 169 | 1.716667 | 2.90116723 | Agrobacterium genomosp. 5 str. CFBP 6626 | 1183435 | Bacteria | Bacteria | 118 | 1.1999999999999999e-32 | NR | CUX21345.1 | 1183435 | g36008 | i0 | 100 | 0.994082840236686 | 56 | 0 | 99.4 | 0 | 1 | 168 | 27 | 82 | CUX21345.1 conserved hypothetical protein [Agrobacterium genomosp. 5 str. CFBP 6626] | diamond | 168 | 118 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Agrobacterium | Agrobacterium genomosp. 5 | ||
| 28012923 | 28012923 | PRJEB55122_P_NODE_29885_length_192_cov_1.454545_g29488_i0 | PRJEB55122 | 29885 | 192 | 1.454545 | 2.7927264 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 127 | 1.2e-35 | NR | HWP20848.1 | 2030806 | g29488 | i0 | 95.1 | 0.953125 | 61 | 3 | 95.3 | 0 | 190 | 8 | 103 | 163 | HWP20848.1 GFA family protein [Burkholderiaceae bacterium] | diamond | 183 | 127 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium | |||
| 28075763 | 28075763 | PRJEB55122_P_NODE_43325_length_162_cov_0.920354_g42928_i0 | PRJEB55122 | 43325 | 162 | 0.920354 | 1.49097348 | Sphingopyxis alaskensis | 117207 | Bacteria | Bacteria | 78.6 | 5.13e-17 | NR | WP_409743831.1 | 117207 | g42928 | i0 | 81.8 | 1.62962962962963 | 44 | 8 | 81.5 | 0 | 1 | 132 | 78 | 121 | WP_409743831.1 hypothetical protein [Sphingopyxis alaskensis] | diamond | 264 | 78.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingopyxis | Sphingopyxis alaskensis | ||
| 28265152 | 28265152 | PRJEB55122_P_NODE_34666_length_175_cov_1.285714_g34269_i0 | PRJEB55122 | 34666 | 175 | 1.285714 | 2.2499995 | Pseudomonas sp. Xaverov 259 | 2666086 | Bacteria | Bacteria | 63.2 | 5.39e-10 | NR | WP_219270076.1 | 2666086 | g34269 | i0 | 52.7 | 0.942857142857143 | 55 | 26 | 94.3 | 0 | 174 | 10 | 64 | 118 | WP_219270076.1 hypothetical protein [Pseudomonas sp. Xaverov 259] | diamond | 165 | 63.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. Xaverov 259 | ||
| 28359882 | 28359882 | PRJEB55122_P_NODE_38846_length_167_cov_0.881356_g38449_i0 | PRJEB55122 | 38846 | 167 | 0.881356 | 1.47186452 | Brevundimonas sp. | 1871086 | Bacteria | Bacteria | 111 | 4.85e-29 | NR | WP_374390274.1 | 1871086 | g38449 | i0 | 92.7 | 0.988023952095808 | 55 | 4 | 98.8 | 0 | 3 | 167 | 85 | 139 | WP_374390274.1 type II secretion system minor pseudopilin GspJ [Brevundimonas sp.] | diamond | 165 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas sp. | ||
| 28454964 | 28454964 | PRJEB55122_P_NODE_43186_length_162_cov_0.920354_g42789_i0 | PRJEB55122 | 43186 | 162 | 0.920354 | 1.49097348 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 65.5 | 2.23e-12 | NR | WP_163540333.1 | 573 | g42789 | i0 | 96.9 | 1.18518518518519 | 32 | 1 | 59.3 | 0 | 66 | 161 | 1 | 32 | WP_163540333.1 glycosyltransferase, partial [Klebsiella pneumoniae] | diamond | 192 | 65.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28549693 | 28549693 | PRJEB55122_P_NODE_20587_length_243_cov_2.345361_g20190_i0 | PRJEB55122 | 20587 | 243 | 2.345361 | 5.69922723 | Aeromonas sp. SG16 | 2950548 | Bacteria | Bacteria | 92 | 1.01e-22 | NR | WP_255936592.1 | 2950548 | g20190 | i0 | 100 | 0.604938271604938 | 49 | 0 | 60.5 | 0 | 155 | 9 | 1 | 49 | WP_255936592.1 hypothetical protein [Aeromonas sp. SG16] | diamond | 147 | 92 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas sp. SG16 | ||
| 28675911 | 28675911 | PRJEB55122_P_NODE_38187_length_167_cov_1.694915_g37790_i0 | PRJEB55122 | 38187 | 167 | 1.694915 | 2.83050805 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 66.6 | 4.64e-11 | NR | WP_294060757.1 | 28214 | g37790 | i0 | 85.3 | 0.610778443113772 | 34 | 5 | 61.1 | 0 | 103 | 2 | 1 | 34 | WP_294060757.1 N-acetyltransferase [Sphingomonas sp.] | diamond | 102 | 66.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 28770453 | 28770453 | PRJEB55122_P_NODE_16007_length_288_cov_1.803347_g15610_i0 | PRJEB55122 | 16007 | 288 | 1.803347 | 5.19363936 | Paraburkholderia dipogonis | 1211383 | Bacteria | Bacteria | 141 | 3.73e-40 | NR | WP_408394392.1 | 1211383 | g15610 | i0 | 76.4 | 0.927083333333333 | 89 | 21 | 92.7 | 0 | 18 | 284 | 17 | 105 | WP_408394392.1 hypothetical protein [Paraburkholderia dipogonis] | diamond | 267 | 141 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia dipogonis | ||
| 28826677 | 28826677 | PRJEB55122_P_NODE_20988_length_240_cov_2.759162_g20591_i0 | PRJEB55122 | 20988 | 240 | 2.759162 | 6.6219888 | root | 1 | Root_unresolved | Root_unresolved | 129 | 1.6200000000000002e-36 | NR | WP_219199615.1 | 487 | g20591 | i0 | 81 | 38.5 | 79 | 15 | 98.8 | 0 | 239 | 3 | 39 | 117 | WP_219199615.1 eS7 family ribosomal protein, partial [Neisseria meningitidis] | diamond | 9240 | 130 | 0.992307692307692 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria meningitidis | ||
| 28991846 | 28991846 | PRJEB55122_P_NODE_32488_length_182_cov_2.345865_g32091_i0 | PRJEB55122 | 32488 | 182 | 2.345865 | 4.2694743 | Aeromonas sp. SG16 | 2950548 | Bacteria | Bacteria | 112 | 4.01e-29 | NR | WP_255936594.1 | 2950548 | g32091 | i0 | 98.3 | 0.989010989010989 | 60 | 1 | 98.9 | 0 | 181 | 2 | 128 | 187 | WP_255936594.1 hypothetical protein [Aeromonas sp. SG16] | diamond | 180 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas sp. SG16 | ||
| 29149814 | 29149814 | PRJEB55122_P_NODE_41389_length_164_cov_0.904348_g40992_i0 | PRJEB55122 | 41389 | 164 | 0.904348 | 1.48313072 | Psychrobacter sp. 5A.1 | 3035207 | Bacteria | Bacteria | 95.1 | 1.44e-21 | NR | WP_290190439.1 | 3035207 | g40992 | i0 | 87 | 0.98780487804878 | 54 | 7 | 98.8 | 0 | 164 | 3 | 288 | 341 | WP_290190439.1 formimidoylglutamase [Psychrobacter sp. 5A.1] | diamond | 162 | 95.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. 5A.1 | ||
| 29181160 | 29181160 | PRJEB55122_P_NODE_35689_length_171_cov_2.557377_g35292_i0 | PRJEB55122 | 35689 | 171 | 2.557377 | 4.37311467 | Roseateles sp. | 1971397 | Bacteria | Bacteria | 60.8 | 1.29e-10 | NR | MEE8615070.1 | 1971397 | g35292 | i0 | 100 | 0.508771929824561 | 29 | 0 | 50.9 | 0 | 88 | 2 | 1 | 29 | MEE8615070.1 hypothetical protein [Roseateles sp.] | diamond | 87 | 60.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. | ||
| 29212731 | 29212731 | PRJEB55122_P_NODE_31829_length_185_cov_1.147059_g31432_i0 | PRJEB55122 | 31829 | 185 | 1.147059 | 2.12205915 | Vibrio | 662 | Bacteria | Bacteria | 130 | 1.1599999999999999e-34 | NR | WP_170907217.1 | 662 | g31432 | i0 | 98.4 | 0.989189189189189 | 61 | 1 | 98.9 | 0 | 1 | 183 | 65 | 125 | WP_170907217.1 MULTISPECIES: glycosyltransferase [Vibrio] | diamond | 183 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | |||
| 29528375 | 29528375 | PRJEB55122_P_NODE_38510_length_167_cov_0.881356_g38113_i0 | PRJEB55122 | 38510 | 167 | 0.881356 | 1.47186452 | Rhizobiaceae bacterium | 1913961 | Bacteria | Bacteria | 115 | 1.49e-29 | NR | RYE64724.1 | 1913961 | g38113 | i0 | 100 | 0.988023952095808 | 55 | 0 | 98.8 | 0 | 165 | 1 | 127 | 181 | RYE64724.1 MAG: porin, partial [Rhizobiaceae bacterium] | diamond | 165 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobiaceae bacterium | |||
| 29654209 | 29654209 | PRJEB55122_P_NODE_40850_length_165_cov_0.896552_g40453_i0 | PRJEB55122 | 40850 | 165 | 0.896552 | 1.4793108 | Sphingomonas sp. LY29 | 3095341 | Bacteria | Bacteria | 73.2 | 2.46e-13 | NR | WP_324807231.1 | 3095341 | g40453 | i0 | 64.8 | 1.96363636363636 | 54 | 19 | 98.2 | 0 | 165 | 4 | 474 | 527 | WP_324807231.1 hypothetical protein [Sphingomonas sp. LY29] | diamond | 324 | 73.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. LY29 | ||
| 29679080 | 29679080 | PRJEB55122_P_NODE_43830_length_162_cov_0.876106_g43433_i0 | PRJEB55122 | 43830 | 162 | 0.876106 | 1.41929172 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 49.7 | 4.3e-5 | NR | WP_104227822.1 | 747 | g43433 | i0 | 87.5 | 1.81481481481481 | 24 | 3 | 44.4 | 0 | 160 | 89 | 365 | 388 | WP_104227822.1 type IV secretion system protein VirB10 [Pasteurella multocida] | diamond | 294 | 49.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Pasteurella | Pasteurella multocida | ||
| 29717442 | 29717442 | PRJEB55122_P_NODE_25550_length_212_cov_0.957055_g25153_i0 | PRJEB55122 | 25550 | 212 | 0.957055 | 2.0289566 | Thiobacillus denitrificans | 36861 | Bacteria | Bacteria | 55.1 | 1.12e-6 | NR | WP_272867454.1 | 36861 | g25153 | i0 | 40.7 | 0.764150943396226 | 54 | 32 | 76.4 | 0 | 178 | 17 | 1183 | 1236 | WP_272867454.1 RHS repeat-associated core domain-containing protein [Thiobacillus denitrificans] | diamond | 162 | 55.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Thiobacillaceae | Thiobacillus | Thiobacillus denitrificans | ||
| 29932272 | 29932272 | PRJEB55122_P_NODE_33851_length_178_cov_0.984496_g33454_i0 | PRJEB55122 | 33851 | 178 | 0.984496 | 1.75240288 | Bacteria | 2 | Bacteria | Bacteria | 108 | 9.03e-26 | NR | MDH5175601.1 | 1913989 | g33454 | i0 | 83.1 | 3.97752808988764 | 59 | 10 | 99.4 | 0 | 2 | 178 | 425 | 483 | MDH5175601.1 response regulator [Gammaproteobacteria bacterium] | diamond | 708 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 29970372 | 29970372 | PRJEB55122_P_NODE_39351_length_166_cov_0.888889_g38954_i0 | PRJEB55122 | 39351 | 166 | 0.888889 | 1.47555574 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 76.3 | 1.93e-14 | NR | WP_294060288.1 | 28214 | g38954 | i0 | 78.2 | 0.993975903614458 | 55 | 12 | 99.4 | 0 | 2 | 166 | 103 | 157 | WP_294060288.1 MATE family efflux transporter [Sphingomonas sp.] | diamond | 165 | 76.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 30255021 | 30255021 | PRJEB55122_P_NODE_30732_length_189_cov_1.385714_g30335_i0 | PRJEB55122 | 30732 | 189 | 1.385714 | 2.61899946 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 92.4 | 4.570000000000001e-22 | NR | MEL6702598.1 | 1977087 | g30335 | i0 | 67.8 | 0.936507936507937 | 59 | 19 | 93.7 | 0 | 188 | 12 | 26 | 84 | MEL6702598.1 uL15 family ribosomal protein [Pseudomonadota bacterium] | diamond | 177 | 92.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30381521 | 30381521 | PRJEB55122_P_NODE_20053_length_247_cov_3.500000_g19656_i0 | PRJEB55122 | 20053 | 247 | 3.5 | 8.645 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 50.8 | 5.53e-5 | NR | MDY6930075.1 | 1977087 | g19656 | i0 | 53.5 | 0.522267206477733 | 43 | 20 | 52.2 | 0 | 223 | 95 | 200 | 242 | MDY6930075.1 reverse transcriptase family protein [Pseudomonadota bacterium] | diamond | 129 | 50.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30823463 | 30823463 | PRJEB55122_P_NODE_40154_length_165_cov_1.646552_g39757_i0 | PRJEB55122 | 40154 | 165 | 1.646552 | 2.7168108 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 117 | 1.91e-29 | NR | MBY0368636.1 | 2030806 | g39757 | i0 | 100 | 1 | 55 | 0 | 100 | 0 | 165 | 1 | 199 | 253 | MBY0368636.1 TniQ family protein [Burkholderiaceae bacterium] | diamond | 165 | 117 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium | |||
| 30950000 | 30950000 | PRJEB55122_P_NODE_42214_length_163_cov_0.912281_g41817_i0 | PRJEB55122 | 42214 | 163 | 0.912281 | 1.48701803 | Thiolapillus sp. | 2017437 | Bacteria | Bacteria | 45.1 | 0.00182 | NR | WP_293716011.1 | 2017437 | g41817 | i0 | 48.8 | 0.754601226993865 | 41 | 21 | 75.5 | 0 | 40 | 162 | 43 | 83 | WP_293716011.1 RNA-directed DNA polymerase, partial [Thiolapillus sp.] | diamond | 123 | 45.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Sedimenticolaceae | Thiolapillus | Thiolapillus sp. | ||
| 31006247 | 31006247 | PRJEB55122_P_NODE_41454_length_164_cov_0.904348_g41057_i0 | PRJEB55122 | 41454 | 164 | 0.904348 | 1.48313072 | Herbaspirillum | 963 | Bacteria | Bacteria | 99 | 2.01e-22 | NR | WP_276843880.1 | 863372 | g41057 | i0 | 100 | 1.97560975609756 | 54 | 0 | 98.8 | 0 | 3 | 164 | 799 | 852 | WP_276843880.1 type VI secretion system Vgr family protein [Herbaspirillum huttiense] | diamond | 324 | 99 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 31107672 | 31107672 | PRJEB55122_P_NODE_12095_length_354_cov_1.806557_g11698_i0 | PRJEB55122 | 12095 | 354 | 1.806557 | 6.39521178 | Roseateles sp. | 1971397 | Bacteria | Bacteria | 47 | 0.00365 | NR | HEY0954394.1 | 1971397 | g11698 | i0 | 34 | 0.822033898305085 | 97 | 53 | 80.5 | 3 | 10 | 294 | 136 | 223 | HEY0954394.1 oligosaccharide flippase family protein [Roseateles sp.] | diamond | 291 | 47 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. | ||
| 31645259 | 31645259 | PRJEB55122_P_NODE_28917_length_196_cov_1.414966_g28520_i0 | PRJEB55122 | 28917 | 196 | 1.414966 | 2.77333336 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 41.6 | 0.0496 | NR | NBB83544.1 | 1913988 | g28520 | i0 | 34.7 | 0.75 | 49 | 31 | 75 | 1 | 169 | 23 | 83 | 130 | NBB83544.1 hypothetical protein [Alphaproteobacteria bacterium] | diamond | 147 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 31708664 | 31708664 | PRJEB55122_P_NODE_37557_length_168_cov_0.873950_g37160_i0 | PRJEB55122 | 37557 | 168 | 0.87395 | 1.468236 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 76.6 | 8.16e-15 | NR | HVJ02256.1 | 28214 | g37160 | i0 | 84.4 | 1.55357142857143 | 45 | 7 | 80.4 | 0 | 34 | 168 | 1 | 45 | HVJ02256.1 methyl-accepting chemotaxis protein [Sphingomonas sp.] | diamond | 261 | 76.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 31866653 | 31866653 | PRJEB55122_P_NODE_31197_length_187_cov_1.507246_g30800_i0 | PRJEB55122 | 31197 | 187 | 1.507246 | 2.81855002 | Ketogulonicigenium vulgare WSH- | 92945 | Bacteria | Bacteria | 44.7 | 3.61e-4 | NR | AEM41219.1 | 759362 | g30800 | i0 | 85.2 | 0.433155080213904 | 27 | 4 | 43.3 | 0 | 118 | 38 | 25 | 51 | AEM41219.1 hypothetical protein KVU_1381 [Ketogulonicigenium vulgare WSH-001] | diamond | 81 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Ketogulonicigenium | Ketogulonicigenium vulgare | ||
| 31923300 | 31923300 | PRJEB55122_P_NODE_38477_length_167_cov_0.881356_g38080_i0 | PRJEB55122 | 38477 | 167 | 0.881356 | 1.47186452 | Pseudomonadota | 1224 | Bacteria | Bacteria | 87 | 6.88e-21 | NR | MCH5899274.1 | 28901 | g38080 | i0 | 87 | 1.65269461077844 | 46 | 6 | 82.6 | 0 | 164 | 27 | 31 | 76 | MCH5899274.1 hypothetical protein [Salmonella enterica] | diamond | 276 | 87 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 31961675 | 31961675 | PRJEB55122_P_NODE_34058_length_177_cov_1.250000_g33661_i0 | PRJEB55122 | 34058 | 177 | 1.25 | 2.2125 | Chitinibacter sp. ZOR | 2051680 | Bacteria | Bacteria | 112 | 6.94e-28 | NR | WP_047393721.1 | 1339254 | g33661 | i0 | 98.3 | 0.983050847457627 | 58 | 1 | 98.3 | 0 | 175 | 2 | 203 | 260 | WP_047393721.1 outer membrane protein assembly factor BamC [Chitinibacter sp. ZOR0017] | diamond | 174 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chitinibacteraceae | Chitinibacter | Chitinibacter sp. ZOR0017 | ||
| 32088296 | 32088296 | PRJEB55122_P_NODE_39158_length_166_cov_1.675214_g38761_i0 | PRJEB55122 | 39158 | 166 | 1.675214 | 2.78085524 | Escherichia coli | 562 | Bacteria | Bacteria | 90.1 | 5.16e-20 | NR | HAL9652624.1 | 562 | g38761 | i0 | 100 | 1.98795180722892 | 55 | 0 | 99.4 | 0 | 165 | 1 | 227 | 281 | HAL9652624.1 MobA/MobL family protein [Escherichia coli] | diamond | 330 | 90.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32278358 | 32278358 | PRJEB55122_P_NODE_25899_length_210_cov_1.285714_g25502_i0 | PRJEB55122 | 25899 | 210 | 1.285714 | 2.6999994 | Bradyrhizobium sp. LVM 1 | 376 | Bacteria | Bacteria | 39.7 | 0.032 | NR | WP_164718652.1 | 2341115 | g25502 | i0 | 35 | 0.571428571428571 | 40 | 26 | 57.1 | 0 | 51 | 170 | 4 | 43 | WP_164718652.1 hypothetical protein [Bradyrhizobium sp. LVM 105] | diamond | 120 | 39.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. LVM 105 | ||
| 32373234 | 32373234 | PRJEB55122_P_NODE_39459_length_166_cov_0.888889_g39062_i0 | PRJEB55122 | 39459 | 166 | 0.888889 | 1.47555574 | Limnobacter sp. | 2003368 | Bacteria | Bacteria | 112 | 3.0100000000000004e-27 | NR | MDH4396538.1 | 2003368 | g39062 | i0 | 96.3 | 0.975903614457831 | 54 | 2 | 97.6 | 0 | 165 | 4 | 135 | 188 | MDH4396538.1 efflux transporter outer membrane subunit [Limnobacter sp.] | diamond | 162 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Limnobacter | Limnobacter sp. | ||
| 32404817 | 32404817 | PRJEB55122_P_NODE_38839_length_167_cov_0.881356_g38442_i0 | PRJEB55122 | 38839 | 167 | 0.881356 | 1.47186452 | Agrobacterium pusense | 648995 | Bacteria | Bacteria | 126 | 2.56e-33 | NR | WP_312622346.1 | 648995 | g38442 | i0 | 100 | 0.988023952095808 | 55 | 0 | 98.8 | 0 | 2 | 166 | 12 | 66 | WP_312622346.1 glycosyltransferase family 61 protein [Agrobacterium pusense] | diamond | 165 | 126 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Agrobacterium | Agrobacterium pusense | ||
| 32468273 | 32468273 | PRJEB55122_P_NODE_26739_length_206_cov_1.286624_g26342_i0 | PRJEB55122 | 26739 | 206 | 1.286624 | 2.65044544 | Thermopetrobacter sp. | 2268141 | Bacteria | Bacteria | 43.1 | 0.0109 | NR | HHN66535.1 | 2268141 | g26342 | i0 | 36.7 | 0.713592233009709 | 49 | 31 | 71.4 | 0 | 187 | 41 | 88 | 136 | HHN66535.1 peptidylprolyl isomerase [Thermopetrobacter sp.] | diamond | 147 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Thermopetrobacter | Thermopetrobacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;