RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB55122" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB55122 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26843866 26843866 PRJEB55122_P_NODE_27061_length_204_cov_2.012903_g26664_i0 PRJEB55122 27061 204 2.012903 4.10632212 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 55.8 5.28e-7   NR XCO56027.1 3233859 g26664 i0 43.3 1.97058823529412 67 36 98.5 1 3 203 471 535 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 402 55.8 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1
27096729 27096729 PRJEB55122_P_NODE_11122_length_376_cov_0.914373_g10725_i0 PRJEB55122 11122 376 0.914373 3.43804248 brine shrimp arlivirus 9 2900384 Viruses Viruses 246 9.28e-73   NR UNI74144.1 2900384 g10725 i0 89.6 0.997340425531915 125 13 99.7 0 2 376 92 216 UNI74144.1 MAG: RNA-dependent RNA polymerase [brine shrimp arlivirus 9] diamond 375 246 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9
28738955 28738955 PRJEB55122_P_NODE_16547_length_282_cov_1.223176_g16150_i0 PRJEB55122 16547 282 1.223176 3.44935632 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 48.9 4.19e-4   NR XCO56027.1 3233859 g16150 i0 35.6 0.925531914893617 87 56 92.6 0 1 261 595 681 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 261 48.9 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;