RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJEB50765" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB50765 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26931905 26931905 PRJEB50765_P_NODE_3322_length_150_cov_1.362832_g3298_i0 PRJEB50765 3322 150 1.362832 2.044248 Pseudomonadati 3379134 Bacteria Bacteria 90.1 3.44e-21   NR MBT7377214.1 2026760 g3298 i0 85.4 9.6 48 7 96 0 146 3 115 162 MBT7377214.1 F0F1 ATP synthase subunit alpha [Fidelibacterota bacterium] diamond 1440 90.9 0.991199119911991 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;