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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJEB50332" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 20 ✖

bioproject 1

  • PRJEB50332 · 20 ✖

analysis 1

  • diamond · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1393893 1393893 PRJEB50332_P_NODE_5982_length_254_cov_1.658031_g5900_i0 PRJEB50332 5982 254 1.658031 4.21139874 Auxenochlorella protothecoides 3075 Plants Plants 85.5 3.9e-17   NR XP_011397204.1 3075 g5900 i0 48.8 6 84 43 99.2 0 253 2 937 1020 XP_011397204.1 Eukaryotic translation initiation factor 5B [Auxenochlorella protothecoides] diamond 1524 85.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
6497739 6497739 PRJEB50332_P_NODE_766_length_609_cov_1.614964_g689_i0 PRJEB50332 766 609 1.614964 9.83513076 Eukaryota 2759 Plants Plants 169 2.8e-45   NR KAK9819769.1 41462 g689 i0 56.3 2.5615763546798 176 65 85.7 6 8 529 288 453 KAK9819769.1 hypothetical protein WJX72_002177 [[Myrmecia] bisecta] diamond 1560 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
19245067 19245067 PRJEB50332_P_NODE_616_length_693_cov_4.221519_g546_i0 PRJEB50332 616 693 4.221519 29.25512667 root 1 Root_unresolved Root_unresolved 227 4.39e-71   NR XP_011396691.1 3075 g546 i0 53.6 10.6796536796537 224 104 97 0 21 692 5 228 XP_011396691.1 60S ribosomal protein L7-2 [Auxenochlorella protothecoides] diamond 7401 229 0.991266375545852 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
20520355 20520355 PRJEB50332_P_NODE_1917_length_404_cov_9.428571_g1836_i0 PRJEB50332 1917 404 9.428571 38.09142684 Trebouxia sp. C 2796353 Plants Plants 74.3 3.43e-14   NR KAL0042167.1 2905653 g1836 i0 54 1.47772277227723 63 28 46 1 362 177 3 65 KAL0042167.1 hypothetical protein WJX77_005300 [Trebouxia sp. C0004] diamond 597 74.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
27279774 27279774 PRJEB50332_P_NODE_7443_length_239_cov_1.455056_g7361_i0 PRJEB50332 7443 239 1.455056 3.47758384 Volvocaceae 3065 Plants Plants 102 4.65e-24   NR KXZ55742.1 33097 g7361 i0 73.5 6.75313807531381 68 18 85.4 0 238 35 130 197 KXZ55742.1 hypothetical protein GPECTOR_2g1292 [Gonium pectorale] diamond 1614 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
27318152 27318152 PRJEB50332_P_NODE_12103_length_213_cov_1.282895_g12021_i0 PRJEB50332 12103 213 1.282895 2.73256635 Gonium pectorale 33097 Plants Plants 101 6.72e-24   NR KXZ42127.1 33097 g12021 i0 71 1.94366197183099 69 20 97.2 0 208 2 178 246 KXZ42127.1 hypothetical protein GPECTOR_199g355 [Gonium pectorale] diamond 414 101 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
27349854 27349854 PRJEB50332_P_NODE_8723_length_232_cov_1.163743_g8641_i0 PRJEB50332 8723 232 1.163743 2.69988376 Chlorella sorokiniana 3076 Plants Plants 61.2 3.48e-9   NR PRW58146.1 3076 g8641 i0 47.4 0.982758620689655 76 32 98.3 2 230 3 78 145 PRW58146.1 histidine triad nucleotide-binding 3 [Chlorella sorokiniana] diamond 228 61.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
27469355 27469355 PRJEB50332_P_NODE_1543_length_447_cov_2.134715_g1462_i0 PRJEB50332 1543 447 2.134715 9.54217605 Eukaryota 2759 Plants Plants 104 1.8e-25   NR KAI3429597.1 3077 g1462 i0 50.4 7.81208053691275 131 64 87.2 1 23 412 3 133 KAI3429597.1 hypothetical protein D9Q98_005683 [Chlorella vulgaris] diamond 3492 105 0.990476190476191 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
27949614 27949614 PRJEB50332_P_NODE_4525_length_283_cov_1.171171_g4443_i0 PRJEB50332 4525 283 1.171171 3.31441393 Coccomyxa subellipsoidea C-169 574566 Plants Plants 88.2 6.5e-20   NR XP_005645581.1 574566 g4443 i0 76.6 2.03533568904594 64 15 67.8 0 192 1 73 136 XP_005645581.1 ClpS-like protein, partial [Coccomyxa subellipsoidea C-169] diamond 576 88.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
28605900 28605900 PRJEB50332_P_NODE_2507_length_359_cov_0.872483_g2425_i0 PRJEB50332 2507 359 0.872483 3.13221397 Eukaryota 2759 Plants Plants 159 1.3099999999999999e-42   NR PRW44958.1 3076 g2425 i0 67.8 8.92479108635098 118 38 98.6 0 359 6 682 799 PRW44958.1 tyrosine--tRNA ligase cytoplasmic [Chlorella sorokiniana] diamond 3204 160 0.99375 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28612647 28612647 PRJEB50332_P_NODE_8547_length_233_cov_1.261628_g8465_i0 PRJEB50332 8547 233 1.261628 2.93959324 Symbiochloris irregularis 706552 Plants Plants 45.1 0.00492   NR KAK9794941.1 706552 g8465 i0 39.7 1.5450643776824 58 30 73.4 2 2 172 49 102 KAK9794941.1 hypothetical protein WJX73_003217 [Symbiochloris irregularis] diamond 360 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
29174375 29174375 PRJEB50332_P_NODE_3829_length_302_cov_0.917012_g3747_i0 PRJEB50332 3829 302 0.917012 2.76937624 root 1 Root_unresolved Root_unresolved 127 4.98e-32   NR KXZ48195.1 33097 g3747 i0 58.2 5.82119205298013 98 41 97.4 0 294 1 270 367 KXZ48195.1 hypothetical protein GPECTOR_29g102 [Gonium pectorale] diamond 1758 127 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
29237500 29237500 PRJEB50332_P_NODE_14889_length_207_cov_0.890411_g14807_i0 PRJEB50332 14889 207 0.890411 1.84315077 Picochlorum 249344 Plants Plants 148 1.91e-39   NR WPT16125.1 1470871 g14807 i0 97.1 1.97101449275362 68 2 98.6 0 2 205 977 1044 WPT16125.1 Putative formate transporter [Picochlorum sp. SENEW3] diamond 408 148 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
30159676 30159676 PRJEB50332_P_NODE_14652_length_207_cov_1.458904_g14570_i0 PRJEB50332 14652 207 1.458904 3.01993128 [Myrmecia] bisecta 41462 Plants Plants 60.1 1.78e-8   NR KAK9812620.1 41462 g14570 i0 51.7 0.840579710144927 58 28 84.1 0 197 24 398 455 KAK9812620.1 hypothetical protein WJX72_000751 [[Myrmecia] bisecta] diamond 174 60.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30279999 30279999 PRJEB50332_P_NODE_11412_length_217_cov_0.910256_g11330_i0 PRJEB50332 11412 217 0.910256 1.97525552 Chlorophyta 3041 Plants Plants 124 7.22e-31   NR XP_002949227.1 3068 g11330 i0 75 42.7465437788018 72 18 99.5 0 216 1 1269 1340 XP_002949227.1 uncharacterized protein VOLCADRAFT_104170 [Volvox carteri f. nagariensis] diamond 9276 125 0.992 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
30570401 30570401 PRJEB50332_P_NODE_18413_length_192_cov_2.473282_g18331_i0 PRJEB50332 18413 192 2.473282 4.74870144 Raphidocelis subcapitata 307507 Plants Plants 79.7 1.71e-15   NR GBF90904.1 307507 g18331 i0 61.9 3.84375 63 23 98.4 1 2 190 71 132 GBF90904.1 aldehyde dehydrogenase [Raphidocelis subcapitata] diamond 738 79.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
31132349 31132349 PRJEB50332_P_NODE_675_length_657_cov_1.887584_g601_i0 PRJEB50332 675 657 1.887584 12.40142688 Eukaryota 2759 Plants Plants 315 5.02e-105   NR BAC57979.1 3055 g601 i0 67.7 161.680365296804 220 70 100 1 657 1 34 253 BAC57979.1 casein kinase I, partial [Chlamydomonas reinhardtii] diamond 106224 318 0.990566037735849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
31259108 31259108 PRJEB50332_P_NODE_16475_length_204_cov_1.433566_g16393_i0 PRJEB50332 16475 204 1.433566 2.92447464 Coccomyxa 41891 Plants Plants 72.4 4.36e-13   NR KAK9917142.1 248742 g16393 i0 54.1 2.69117647058824 61 21 89.7 2 15 197 200 253 KAK9917142.1 hypothetical protein WJX75_001261 [Coccomyxa subellipsoidea] diamond 549 72.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
31607044 31607044 PRJEB50332_P_NODE_836_length_585_cov_1.988550_g758_i0 PRJEB50332 836 585 1.98855 11.6330175 Volvocaceae 3065 Plants Plants 76.3 2.16e-12   NR KXZ53948.1 33097 g758 i0 31.7 5.56923076923077 183 110 89.7 6 533 9 2 177 KXZ53948.1 hypothetical protein GPECTOR_6g866 [Gonium pectorale] diamond 3258 76.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
32625773 32625773 PRJEB50332_P_NODE_760_length_611_cov_1.274545_g683_i0 PRJEB50332 760 611 1.274545 7.78746995 Chlorella ohadii 2649997 Plants Plants 48.5 0.00741   NR KAI7842820.1 2649997 g683 i0 48.7 0.191489361702128 39 20 19.1 0 2 118 239 277 KAI7842820.1 hypothetical protein COHA_003566 [Chlorella ohadii] diamond 117 48.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella ohadii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;