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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJEB50332" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 13 ✖

bioproject 1

  • PRJEB50332 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20520435 20520435 PRJEB50332_P_NODE_9717_length_226_cov_1.466667_g9635_i0 PRJEB50332 9717 226 1.466667 3.31466742 Bacteria 2 Bacteria Bacteria 103 3.5399999999999995e-24   NR OGG00794.1 1817867 g9635 i0 59.2 6.73008849557522 71 29 94.2 0 5 217 265 335 OGG00794.1 MAG: hypothetical protein A3F83_02335 [Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11] diamond 1521 103 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11
26812066 26812066 PRJEB50332_P_NODE_3741_length_304_cov_2.181070_g3659_i0 PRJEB50332 3741 304 2.18107 6.6304528 Patescibacteria group bacterium 2052139 Bacteria Bacteria 152 4.08e-41   NR MCL4419431.1 2052139 g3659 i0 80.6 0.917763157894737 93 17 90.8 1 303 28 495 587 MCL4419431.1 hypothetical protein [Patescibacteria group bacterium] diamond 279 152 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27318158 27318158 PRJEB50332_P_NODE_9003_length_230_cov_1.497041_g8921_i0 PRJEB50332 9003 230 1.497041 3.4431943 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 52.4 1.01e-5   NR MCA9324640.1 2026720 g8921 i0 41.9 0.965217391304348 74 36 95.2 4 3 221 57 124 MCA9324640.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 222 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27381377 27381377 PRJEB50332_P_NODE_123_length_1358_cov_9.097147_g91_i0 PRJEB50332 123 1358 9.097147 123.53925626 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 90.9 1.55e-16   NR RTL06913.1 2030827 g91 i0 39.7 0.278350515463918 126 75 27.6 1 196 570 27 152 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 378 90.9 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
27437903 27437903 PRJEB50332_P_NODE_17823_length_202_cov_0.921986_g17741_i0 PRJEB50332 17823 202 0.921986 1.86241172 Bacteria 2 Bacteria Bacteria 126 2.12e-33   NR OJU87599.1 1895829 g17741 i0 95.5 3.98019801980198 67 3 99.5 0 202 2 120 186 OJU87599.1 MAG: type I glyceraldehyde-3-phosphate dehydrogenase [Candidatus Saccharibacteria bacterium 49-20] diamond 804 127 0.992125984251969 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
27665570 27665570 PRJEB50332_P_NODE_12704_length_211_cov_0.866667_g12622_i0 PRJEB50332 12704 211 0.866667 1.82866737 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.2 2.19e-12   NR MDR3548433.1 2053589 g12622 i0 50.7 1.97630331753555 69 33 98.1 1 207 1 118 185 MDR3548433.1 HAD-IC family P-type ATPase [Candidatus Paceibacterota bacterium] diamond 417 71.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27760433 27760433 PRJEB50332_P_NODE_284_length_951_cov_3.723596_g236_i0 PRJEB50332 284 951 3.723596 35.41139796 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 137 1.2e-34   NR RTL06913.1 2030827 g236 i0 35.8 0.712933753943218 226 138 70 3 144 809 15 237 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 678 137 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
27917894 27917894 PRJEB50332_P_NODE_9985_length_224_cov_2.085890_g9903_i0 PRJEB50332 9985 224 2.08589 4.6723936 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.0116   NR HRY51239.1 2053589 g9903 i0 39.1 2.49107142857143 64 35 80.4 1 2 181 49 112 HRY51239.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Paceibacterota bacterium] diamond 558 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29212700 29212700 PRJEB50332_P_NODE_1049_length_529_cov_2.401709_g969_i0 PRJEB50332 1049 529 2.401709 12.70504061 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 55.1 2.82e-5   NR RTL06914.1 2030827 g969 i0 44.6 0.31758034026465 56 31 31.8 0 1 168 365 420 RTL06914.1 MAG: hypothetical protein EKK58_03720 [Candidatus Dependentiae bacterium] diamond 168 55.1 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
29244147 29244147 PRJEB50332_P_NODE_429_length_806_cov_2.259060_g368_i0 PRJEB50332 429 806 2.25906 18.2080236 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 113 4.33e-26   NR RTL06913.1 2030827 g368 i0 30.9 0.807692307692308 217 149 80.8 1 744 94 27 242 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 651 113 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
29244151 29244151 PRJEB50332_P_NODE_8609_length_232_cov_1.982456_g8527_i0 PRJEB50332 8609 232 1.982456 4.59929792 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 144 5.19e-38   NR RKW02477.1 1917697 g8527 i0 98.7 0.982758620689655 76 1 98.3 0 3 230 254 329 RKW02477.1 MAG: ATP-dependent DNA helicase RecG [Candidatus Saccharimonas sp.] diamond 228 144 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
31202108 31202108 PRJEB50332_P_NODE_5535_length_262_cov_2.298507_g5453_i0 PRJEB50332 5535 262 2.298507 6.02208834 Patescibacteria group bacterium 2052139 Bacteria Bacteria 87 1.24e-17   NR MBY0538658.1 2052139 g5453 i0 100 0.480916030534351 42 0 48.1 0 126 1 202 243 MBY0538658.1 ATP-dependent DNA helicase RecG [Patescibacteria group bacterium] diamond 126 87 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31423943 31423943 PRJEB50332_P_NODE_11056_length_218_cov_2.273885_g10974_i0 PRJEB50332 11056 218 2.273885 4.9570693 Patescibacteria group bacterium 2052139 Bacteria Bacteria 124 5.66e-32   NR MCL4419852.1 2052139 g10974 i0 79.2 0.990825688073395 72 15 99.1 0 216 1 258 329 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 216 124 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;