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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJEB49404" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJEB49404 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16676909 16676909 PRJEB49404_P_NODE_280634_length_277_cov_1.336134_g266833_i0 PRJEB49404 280634 277 1.336134 3.70109118 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 157 2.0699999999999998e-42   NR MBV8137665.1 2026735 g266833 i0 79.1 5.91335740072202 91 19 98.6 0 275 3 183 273 MBV8137665.1 FdhF/YdeP family oxidoreductase [Deltaproteobacteria bacterium] diamond 1638 157 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
17964597 17964597 PRJEB49404_P_NODE_548495_length_170_cov_1.358779_g534694_i0 PRJEB49404 548495 170 1.358779 2.3099243 Myxococcus xanthus 34 Bacteria Bacteria 98.6 2.98e-22   NR WP_140792499.1 34 g534694 i0 76.4 1.95882352941176 55 13 97.1 0 165 1 232 286 WP_140792499.1 UvrD-helicase domain-containing protein [Myxococcus xanthus] diamond 333 98.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus
21771541 21771541 PRJEB49404_P_NODE_165358_length_403_cov_1.785714_g151571_i0 PRJEB49404 165358 403 1.785714 7.19642742 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 250 3.7299999999999997e-81   NR MBP1689099.1 2026735 g151571 i0 85.1 2.99255583126551 134 20 99.8 0 403 2 135 268 MBP1689099.1 transposase [Deltaproteobacteria bacterium] diamond 1206 250 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
22668050 22668050 PRJEB49404_P_NODE_585958_length_162_cov_1.504065_g572157_i0 PRJEB49404 585958 162 1.504065 2.4365853 Polyangiales 3031712 Bacteria Bacteria 111 6.22e-28   NR MFO0734638.1 1971228 g572157 i0 94.3 4.90740740740741 53 3 98.1 0 161 3 157 209 MFO0734638.1 IS21-like element helper ATPase IstB [Labilithrix sp.] diamond 795 111 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
25217204 25217204 PRJEB49404_P_NODE_507380_length_180_cov_1.163121_g493579_i0 PRJEB49404 507380 180 1.163121 2.0936178 Polyangiaceae bacterium 2268199 Bacteria Bacteria 93.6 1.88e-20   NR HEX7604230.1 2268199 g493579 i0 76.7 1 60 14 100 0 180 1 16 75 HEX7604230.1 ATP-binding protein [Polyangiaceae bacterium] diamond 180 93.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
26748193 26748193 PRJEB49404_P_NODE_606301_length_158_cov_1.462185_g592500_i0 PRJEB49404 606301 158 1.462185 2.3102523 Stigmatella aurantiaca 41 Bacteria Bacteria 61.6 1.79e-9   NR WP_002615540.1 41 g592500 i0 63.5 0.987341772151899 52 19 98.7 0 158 3 11 62 WP_002615540.1 SDR family oxidoreductase [Stigmatella aurantiaca] diamond 156 61.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Stigmatella Stigmatella aurantiaca
26780442 26780442 PRJEB49404_P_NODE_323501_length_250_cov_1.360190_g309700_i0 PRJEB49404 323501 250 1.36019 3.400475 Myxococcus xanthus 34 Bacteria Bacteria 163 1.2e-47   NR WP_140792497.1 34 g309700 i0 92.8 0.996 83 6 99.6 0 2 250 95 177 WP_140792497.1 PD-(D/E)XK nuclease family protein [Myxococcus xanthus] diamond 249 163 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus
27058417 27058417 PRJEB49404_P_NODE_500002_length_182_cov_1.146853_g486201_i0 PRJEB49404 500002 182 1.146853 2.08727246 Pseudomonadati 3379134 Bacteria Bacteria 74.7 1.5e-14   NR WP_143903617.1 2596829 g486201 i0 63.5 6.36263736263736 52 19 85.7 0 182 27 39 90 WP_143903617.1 7-carboxy-7-deazaguanine synthase [Corallococcus sp. Z5C101001] diamond 1158 74.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus sp. Z5C101001
27222986 27222986 PRJEB49404_P_NODE_596063_length_160_cov_1.487603_g582262_i0 PRJEB49404 596063 160 1.487603 2.3801648 Archangium sp. 1872627 Bacteria Bacteria 51.2 2.34e-6   NR HEY0881708.1 1872627 g582262 i0 66.7 1.81875 33 11 61.9 0 156 58 79 111 HEY0881708.1 c-type cytochrome [Archangium sp.] diamond 291 51.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
27413022 27413022 PRJEB49404_P_NODE_150503_length_431_cov_1.566327_g136724_i0 PRJEB49404 150503 431 1.566327 6.75086937 Polyangiaceae bacterium 2268199 Bacteria Bacteria 139 1.17e-39   NR HEY0469537.1 2268199 g136724 i0 62.4 0.758700696055684 109 39 75.9 2 3 329 16 122 HEY0469537.1 hypothetical protein [Polyangiaceae bacterium] diamond 327 139 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27602411 27602411 PRJEB49404_P_NODE_579404_length_163_cov_2.201613_g565603_i0 PRJEB49404 579404 163 2.201613 3.58862919 Anaeromyxobacter sp. 1872521 Bacteria Bacteria 43.9 0.00235   NR HTN53639.1 1872521 g565603 i0 42 0.920245398773006 50 29 92 0 154 5 40 89 HTN53639.1 hypothetical protein [Anaeromyxobacter sp.] diamond 150 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter sp.
27728907 27728907 PRJEB49404_P_NODE_581384_length_163_cov_1.322581_g567583_i0 PRJEB49404 581384 163 1.322581 2.15580703 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 90.5 6.1e-21   NR HTP25508.1 2510643 g567583 i0 83.3 0.993865030674847 54 9 99.4 0 162 1 51 104 HTP25508.1 HdeD family acid-resistance protein [Anaeromyxobacteraceae bacterium] diamond 162 90.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
28454925 28454925 PRJEB49404_P_NODE_581426_length_163_cov_1.322581_g567625_i0 PRJEB49404 581426 163 1.322581 2.15580703 Polyangiaceae bacterium 2268199 Bacteria Bacteria 85.9 7.64e-18   NR MEO8979435.1 2268199 g567625 i0 71.7 1.95092024539877 53 15 97.5 0 3 161 290 342 MEO8979435.1 hypothetical protein [Polyangiaceae bacterium] diamond 318 85.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28985066 28985066 PRJEB49404_P_NODE_446748_length_197_cov_1.905063_g432947_i0 PRJEB49404 446748 197 1.905063 3.75297411 Pseudomonadati 3379134 Bacteria Bacteria 96.3 2.85e-21   NR WP_140792499.1 34 g432947 i0 73.8 1.97969543147208 65 17 99 0 197 3 45 109 WP_140792499.1 UvrD-helicase domain-containing protein [Myxococcus xanthus] diamond 390 96.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus
29401949 29401949 PRJEB49404_P_NODE_642689_length_151_cov_2.205357_g628888_i0 PRJEB49404 642689 151 2.205357 3.33008907 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 47.4 2.5e-4   NR MDR3135167.1 2026735 g628888 i0 41.2 2.94039735099338 51 29 99.3 1 1 150 212 262 MDR3135167.1 TraM recognition domain-containing protein [Deltaproteobacteria bacterium] diamond 444 47.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29528335 29528335 PRJEB49404_P_NODE_504730_length_180_cov_3.000000_g490929_i0 PRJEB49404 504730 180 3 5.4 Myxococcota bacterium 2818507 Bacteria Bacteria 47.8 2.68e-4   NR MEM7153912.1 2818507 g490929 i0 42.9 0.816666666666667 49 28 81.7 0 27 173 419 467 MEM7153912.1 tetratricopeptide repeat protein [Myxococcota bacterium] diamond 147 47.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30507492 30507492 PRJEB49404_P_NODE_383093_length_221_cov_1.208791_g369292_i0 PRJEB49404 383093 221 1.208791 2.67142811 Polyangia bacterium 3058050 Bacteria Bacteria 63.9 8.95e-11   NR MFL5308085.1 3058050 g369292 i0 58.7 0.624434389140271 46 19 62.4 0 220 83 87 132 MFL5308085.1 hypothetical protein [Polyangia bacterium] diamond 138 63.9 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
30602115 30602115 PRJEB49404_P_NODE_637673_length_152_cov_1.858407_g623872_i0 PRJEB49404 637673 152 1.858407 2.82477864 Archangium violaceum 83451 Bacteria Bacteria 87 4.9900000000000006e-21   NR WP_204224780.1 83451 g623872 i0 72 0.986842105263158 50 14 98.7 0 150 1 19 68 WP_204224780.1 hypothetical protein [Archangium violaceum] diamond 150 87 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
30879831 30879831 PRJEB49404_P_NODE_637094_length_152_cov_2.176991_g623293_i0 PRJEB49404 637094 152 2.176991 3.30902632 Pseudomonadati 3379134 Bacteria Bacteria 79.3 1.34e-15   NR MBV8137665.1 2026735 g623293 i0 70 1.97368421052632 50 15 98.7 0 2 151 276 325 MBV8137665.1 FdhF/YdeP family oxidoreductase [Deltaproteobacteria bacterium] diamond 300 79.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31038174 31038174 PRJEB49404_P_NODE_621875_length_155_cov_1.767241_g608074_i0 PRJEB49404 621875 155 1.767241 2.73922355 Pseudomonadati 3379134 Bacteria Bacteria 100 5.059999999999999e-23   NR WP_407759337.1 1872627 g608074 i0 94.1 10.858064516129 51 3 98.7 0 153 1 524 574 WP_407759337.1 VPS10 domain-containing protein [Archangium sp.] diamond 1683 101 0.99009900990099 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
31234002 31234002 PRJEB49404_P_NODE_406395_length_211_cov_2.226744_g392594_i0 PRJEB49404 406395 211 2.226744 4.69842984 Polyangiaceae bacterium 2268199 Bacteria Bacteria 95.5 6.3e-21   NR HEV3190874.1 2268199 g392594 i0 65.7 1.90521327014218 67 23 95.3 0 9 209 666 732 HEV3190874.1 thioesterase domain-containing protein [Polyangiaceae bacterium] diamond 402 95.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31582253 31582253 PRJEB49404_P_NODE_585036_length_162_cov_1.804878_g571235_i0 PRJEB49404 585036 162 1.804878 2.92390236 Polyangiaceae bacterium 2268199 Bacteria Bacteria 91.3 7.66e-21   NR HEX2733546.1 2268199 g571235 i0 80.8 5.7037037037037 52 10 96.3 0 159 4 91 142 HEX2733546.1 PAS domain S-box protein [Polyangiaceae bacterium] diamond 924 91.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31670242 31670242 PRJEB49404_P_NODE_605377_length_158_cov_1.722689_g591576_i0 PRJEB49404 605377 158 1.722689 2.72184862 Myxococcia 32015 Bacteria Bacteria 87.8 3.71e-19   NR WP_203407045.1 83451 g591576 i0 73.1 5.88607594936709 52 14 98.7 0 2 157 121 172 WP_203407045.1 hypothetical protein [Archangium violaceum] diamond 930 87.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
31993314 31993314 PRJEB49404_P_NODE_511158_length_179_cov_1.207143_g497357_i0 PRJEB49404 511158 179 1.207143 2.16078597 Myxococcales bacterium 2026763 Bacteria Bacteria 96.3 3.24e-22   NR HYV65733.1 2026763 g497357 i0 79.7 1.97765363128492 59 12 98.9 0 177 1 55 113 HYV65733.1 LysR family transcriptional regulator [Myxococcales bacterium] diamond 354 96.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31993316 31993316 PRJEB49404_P_NODE_529238_length_174_cov_2.296296_g515437_i0 PRJEB49404 529238 174 2.296296 3.99555504 Polyangiaceae bacterium 2268199 Bacteria Bacteria 92.8 3.33e-20   NR HEY5243061.1 2268199 g515437 i0 78.9 1.96551724137931 57 12 98.3 0 173 3 290 346 HEY5243061.1 amidohydrolase family protein [Polyangiaceae bacterium] diamond 342 92.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32088251 32088251 PRJEB49404_P_NODE_445358_length_198_cov_1.031447_g431557_i0 PRJEB49404 445358 198 1.031447 2.04226506 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 111 7.68e-30   NR MBI3758645.1 2026735 g431557 i0 100 0.803030303030303 53 0 80.3 0 2 160 62 114 MBI3758645.1 MaoC family dehydratase N-terminal domain-containing protein [Deltaproteobacteria bacterium] diamond 159 111 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32524872 32524872 PRJEB49404_P_NODE_583059_length_163_cov_0.991935_g569258_i0 PRJEB49404 583059 163 0.991935 1.61685405 Myxococcia 32015 Bacteria Bacteria 93.6 1.49e-20   NR MBK6695529.1 2026763 g569258 i0 81.1 1.95092024539877 53 9 97.5 1 161 3 555 606 MBK6695529.1 TIGR04551 family protein [Myxococcales bacterium] diamond 318 94.4 0.991525423728813 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32751804 32751804 PRJEB49404_P_NODE_424180_length_205_cov_1.343373_g410379_i0 PRJEB49404 424180 205 1.343373 2.75391465 Cystobacter ferrugineus 83449 Bacteria Bacteria 67 6.1e-11   NR WP_143177954.1 83449 g410379 i0 51.5 0.995121951219512 68 31 98 2 3 203 491 557 WP_143177954.1 sensor histidine kinase [Cystobacter ferrugineus] diamond 204 67 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter ferrugineus
32751806 32751806 PRJEB49404_P_NODE_442920_length_198_cov_2.515723_g429119_i0 PRJEB49404 442920 198 2.515723 4.98113154 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 102 1.43e-23   NR TMB32751.1 2026735 g429119 i0 75.4 0.984848484848485 65 16 98.5 0 197 3 673 737 TMB32751.1 MAG: PAS domain S-box protein [Deltaproteobacteria bacterium] diamond 195 102 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;