RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB49404" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB49404 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27917866 27917866 PRJEB49404_P_NODE_351285_length_235_cov_2.127551_g337484_i0 PRJEB49404 351285 235 2.127551 4.99974485 Trichonephila clavipes 2585209 Arthropoda Arthropoda 41.6 0.0429   NR GFU75740.1 2585209 g337484 i0 64.3 0.357446808510638 28 10 35.7 0 93 10 110 137 GFU75740.1 hypothetical protein TNCV_1652001 [Trichonephila clavipes] diamond 84 41.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Trichonephila Trichonephila clavipes
29843987 29843987 PRJEB49404_P_NODE_624251_length_155_cov_1.060345_g610450_i0 PRJEB49404 624251 155 1.060345 1.64353475 Trichonephila clavipes 2585209 Arthropoda Arthropoda 41.6 0.015   NR GFU55207.1 2585209 g610450 i0 65.4 1.0258064516129 26 9 50.3 0 62 139 91 116 GFU55207.1 uncharacterized protein TNCV_427081 [Trichonephila clavipes] diamond 159 41.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Trichonephila Trichonephila clavipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;