RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB49404" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJEB49404 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26970099 26970099 PRJEB49404_P_NODE_456082_length_194_cov_2.116129_g442281_i0 PRJEB49404 456082 194 2.116129 4.10529026 Caudoviricetes sp. 2832643 Viruses Viruses 39.3 0.0332   NR DAJ92805.1 2832643 g442281 i0 62.5 0.494845360824742 32 12 49.5 0 33 128 8 39 DAJ92805.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 96 39.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28928332 28928332 PRJEB49404_P_NODE_648968_length_150_cov_1.990991_g635167_i0 PRJEB49404 648968 150 1.990991 2.9864865 Nitrincola phage 1M3-16 1472912 Viruses Viruses 56.2 9.8e-8   NR YP_009037280.1 1472912 g635167 i0 46.9 0.98 49 26 98 0 149 3 103 151 YP_009037280.1 hypothetical protein GJ22_gp062 [Nitrincola phage 1M3-16] diamond 147 56.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Nitrincola phage 1M3-16
30223038 30223038 PRJEB49404_P_NODE_448792_length_197_cov_0.860759_g434991_i0 PRJEB49404 448792 197 0.860759 1.69569523 Halorubrum tailed virus 28 2878009 Viruses Viruses 47 3.15e-4   NR YP_010358334.1 2878009 g434991 i0 85.7 0.426395939086294 28 4 42.6 0 84 1 1 28 YP_010358334.1 hypothetical protein M1M39_gp31 [Halorubrum tailed virus 28] diamond 84 47 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Suolaviridae Pormufvirus Pormufvirus salinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;