RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB48872" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJEB48872 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28454904 28454904 PRJEB48872_P_NODE_672226_length_154_cov_1.965217_g656414_i0 PRJEB48872 672226 154 1.965217 3.02643418 Mitoviridae sp. 2809572 Viruses Viruses 54.3 9.25e-7   NR WAK72431.1 2809572 g656414 i0 60 2.35714285714286 40 16 77.9 0 121 2 200 239 WAK72431.1 MAG: RNA-dependent RNA polymerase, partial [Mitoviridae sp.] diamond 363 54.3 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.
32088240 32088240 PRJEB48872_P_NODE_589098_length_171_cov_1.174242_g573286_i0 PRJEB48872 589098 171 1.174242 2.00795382 Betapolyomavirus macacae 1891767 Viruses Viruses 52.8 4.19e-6   NR AAK29054.1 1891767 g573286 i0 72.2 0.631578947368421 36 10 63.2 0 108 1 494 529 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 108 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32436604 32436604 PRJEB48872_P_NODE_543559_length_181_cov_21.380282_g527747_i0 PRJEB48872 543559 181 21.380282 38.69831042 Pimephales minnow adintovirus 2609864 Viruses Viruses 58.2 3.33e-8   NR DAC81394.1 2609864 g527747 i0 69.4 0.596685082872928 36 11 59.7 0 72 179 7 42 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 108 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;