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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJEB48872" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJEB48872 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
81693 81693 PRJEB48872_P_NODE_506701_length_192_cov_1.071895_g490889_i0 PRJEB48872 506701 192 1.071895 2.0580384 Labilithrix sp. 1971228 Bacteria Bacteria 110 5.41e-29   NR MBX3230404.1 1971228 g490889 i0 85.9 3 64 9 100 0 192 1 69 132 MBX3230404.1 response regulator [Labilithrix sp.] diamond 576 110 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
3915378 3915378 PRJEB48872_P_NODE_663784_length_156_cov_1.222222_g647972_i0 PRJEB48872 663784 156 1.222222 1.90666632 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 110 1.18e-26   NR MBV8137665.1 2026735 g647972 i0 90.4 1 52 5 100 0 1 156 158 209 MBV8137665.1 FdhF/YdeP family oxidoreductase [Deltaproteobacteria bacterium] diamond 156 110 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
5190090 5190090 PRJEB48872_P_NODE_631025_length_162_cov_1.333333_g615213_i0 PRJEB48872 631025 162 1.333333 2.15999946 Pseudomonadati 3379134 Bacteria Bacteria 78.6 2.85e-15   NR MBI5558573.1 2026735 g615213 i0 67.9 2.87037037037037 53 17 98.1 0 160 2 322 374 MBI5558573.1 acyltransferase [Deltaproteobacteria bacterium] diamond 465 79.3 0.991172761664565 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26621895 26621895 PRJEB48872_P_NODE_384341_length_238_cov_1.030151_g368529_i0 PRJEB48872 384341 238 1.030151 2.45175938 Byssovorax sp. 2927945 Bacteria Bacteria 66.2 1.06e-11   NR MFS8064965.1 2927945 g368529 i0 59.6 0.592436974789916 47 19 59.2 0 2 142 80 126 MFS8064965.1 hypothetical protein [Byssovorax sp.] diamond 141 66.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Byssovorax Byssovorax sp.
26931896 26931896 PRJEB48872_P_NODE_641642_length_160_cov_1.355372_g625830_i0 PRJEB48872 641642 160 1.355372 2.1685952 Pseudomonadati 3379134 Bacteria Bacteria 52 6.62e-6   NR WP_136931005.1 889272 g625830 i0 60 5.325 45 18 84.4 0 148 14 266 310 WP_136931005.1 alpha/beta hydrolase family protein [Polyangium fumosum] diamond 852 52 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium fumosum
26970083 26970083 PRJEB48872_P_NODE_606122_length_167_cov_1.351562_g590310_i0 PRJEB48872 606122 167 1.351562 2.25710854 Polyangiaceae bacterium 2268199 Bacteria Bacteria 75.1 5.14e-14   NR HYO97616.1 2268199 g590310 i0 61.1 2.01197604790419 54 21 97 0 163 2 354 407 HYO97616.1 IS66 family transposase [Polyangiaceae bacterium] diamond 336 75.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27096666 27096666 PRJEB48872_P_NODE_508022_length_191_cov_2.157895_g492210_i0 PRJEB48872 508022 191 2.157895 4.12157945 Myxococcales bacterium 2026763 Bacteria Bacteria 63.9 6.03e-11   NR HKC58682.1 2026763 g492210 i0 49.2 0.989528795811518 63 32 99 0 189 1 26 88 HKC58682.1 hypothetical protein [Myxococcales bacterium] diamond 189 63.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27539147 27539147 PRJEB48872_P_NODE_696344_length_150_cov_1.477477_g680532_i0 PRJEB48872 696344 150 1.477477 2.2162155 Labilithrix sp. 1971228 Bacteria Bacteria 94.7 9.15e-22   NR HEY8076409.1 1971228 g680532 i0 83.7 0.98 49 8 98 0 149 3 105 153 HEY8076409.1 mechanosensitive ion channel domain-containing protein [Labilithrix sp.] diamond 147 94.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
28991793 28991793 PRJEB48872_P_NODE_696048_length_150_cov_1.612613_g680236_i0 PRJEB48872 696048 150 1.612613 2.4189195 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 66.6 2.42e-11   NR MBI2371209.1 2026735 g680236 i0 59.6 2.78 47 19 94 0 141 1 1 47 MBI2371209.1 AAA family ATPase [Deltaproteobacteria bacterium] diamond 417 66.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29054773 29054773 PRJEB48872_P_NODE_306108_length_283_cov_1.680328_g290296_i0 PRJEB48872 306108 283 1.680328 4.75532824 Sandaracinus amylolyticus 927083 Bacteria Bacteria 69.7 1.37e-11   NR WP_075097699.1 927083 g290296 i0 56.7 1.47349823321555 67 25 71 1 211 11 201 263 WP_075097699.1 reverse transcriptase domain-containing protein [Sandaracinus amylolyticus] diamond 417 69.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
29995364 29995364 PRJEB48872_P_NODE_559731_length_177_cov_3.362319_g543919_i0 PRJEB48872 559731 177 3.362319 5.95130463 Pseudomonadati 3379134 Bacteria Bacteria 94.4 1.25e-21   NR TNF24063.1 2026735 g543919 i0 72.9 2 59 16 100 0 177 1 109 167 TNF24063.1 MAG: hypothetical protein EP329_25745 [Deltaproteobacteria bacterium] diamond 354 94.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30152938 30152938 PRJEB48872_P_NODE_365192_length_247_cov_1.956731_g349380_i0 PRJEB48872 365192 247 1.956731 4.83312557 Myxococcia 32015 Bacteria Bacteria 102 2.1699999999999998e-23   NR MBK6462605.1 2026763 g349380 i0 79.7 3.54655870445344 59 12 71.7 0 245 69 458 516 MBK6462605.1 fucose isomerase [Myxococcales bacterium] diamond 876 103 0.990291262135922 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30254965 30254965 PRJEB48872_P_NODE_641332_length_160_cov_1.355372_g625520_i0 PRJEB48872 641332 160 1.355372 2.1685952 Polyangiaceae bacterium 2268199 Bacteria Bacteria 58.5 3.19e-8   NR HWL88486.1 2268199 g625520 i0 52.8 1.96875 53 24 97.5 1 2 157 282 334 HWL88486.1 hypothetical protein [Polyangiaceae bacterium] diamond 315 58.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30444400 30444400 PRJEB48872_P_NODE_550793_length_180_cov_1.163121_g534981_i0 PRJEB48872 550793 180 1.163121 2.0936178 Polyangiaceae bacterium 2268199 Bacteria Bacteria 78.6 4.59e-16   NR MCL2450048.1 2268199 g534981 i0 72.9 1.96666666666667 59 16 98.3 0 178 2 30 88 MCL2450048.1 NAD(P)H-binding protein [Polyangiaceae bacterium] diamond 354 78.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31487420 31487420 PRJEB48872_P_NODE_571896_length_175_cov_0.904412_g556084_i0 PRJEB48872 571896 175 0.904412 1.582721 Polyangiaceae bacterium 2268199 Bacteria Bacteria 108 7.96e-26   NR HEX7603728.1 2268199 g556084 i0 79.3 4.95428571428571 58 12 99.4 0 2 175 428 485 HEX7603728.1 coniferyl aldehyde dehydrogenase [Polyangiaceae bacterium] diamond 867 108 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31607040 31607040 PRJEB48872_P_NODE_636656_length_161_cov_1.344262_g620844_i0 PRJEB48872 636656 161 1.344262 2.16426182 Pseudomonadati 3379134 Bacteria Bacteria 41.6 0.0314   NR RLB28831.1 2026735 g620844 i0 40.8 1.77018633540373 49 29 91.3 0 147 1 223 271 RLB28831.1 MAG: hypothetical protein DRH11_16765 [Deltaproteobacteria bacterium] diamond 285 41.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32120041 32120041 PRJEB48872_P_NODE_561698_length_177_cov_1.507246_g545886_i0 PRJEB48872 561698 177 1.507246 2.66782542 Pendulispora brunnea 2905690 Bacteria Bacteria 70.1 3.43e-12   NR WP_394849972.1 2905690 g545886 i0 61.8 10.3220338983051 55 21 93.2 0 11 175 1891 1945 WP_394849972.1 non-ribosomal peptide synthase/polyketide synthase [Pendulispora brunnea] diamond 1827 70.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
32183279 32183279 PRJEB48872_P_NODE_661738_length_156_cov_1.752137_g645926_i0 PRJEB48872 661738 156 1.752137 2.73333372 Myxococcales bacterium 2026763 Bacteria Bacteria 70.9 7.87e-14   NR MFL5250045.1 2026763 g645926 i0 62.5 0.923076923076923 48 18 92.3 0 2 145 84 131 MFL5250045.1 type II toxin-antitoxin system VapC family toxin [Myxococcales bacterium] diamond 144 70.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32404742 32404742 PRJEB48872_P_NODE_505819_length_192_cov_1.549020_g490007_i0 PRJEB48872 505819 192 1.54902 2.9741184 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 71.6 3.21e-13   NR MDD5307038.1 2026735 g490007 i0 53.2 1.953125 62 29 96.9 0 3 188 165 226 MDD5307038.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 375 71.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32745219 32745219 PRJEB48872_P_NODE_644700_length_159_cov_2.041667_g628888_i0 PRJEB48872 644700 159 2.041667 3.24625053 Myxococcia 32015 Bacteria Bacteria 86.3 5.35e-18   NR MCC6334261.1 2026763 g628888 i0 72.5 2.90566037735849 51 14 96.2 0 155 3 46 96 MCC6334261.1 hypothetical protein [Myxococcales bacterium] diamond 462 86.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;