RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB48872" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB48872 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30626974 30626974 PRJEB48872_P_NODE_563653_length_177_cov_0.869565_g547841_i0 PRJEB48872 563653 177 0.869565 1.53913005 Metazoa 33208 Mollusca Mollusca 49.7 5.64e-5   NR WAR17153.1 6604 g547841 i0 46.3 1.35593220338983 41 22 69.5 0 1 123 544 584 WAR17153.1 LOW QUALITY PROTEIN: ZN845-like protein [Mya arenaria] diamond 240 49.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
31107600 31107600 PRJEB48872_P_NODE_475875_length_201_cov_1.808642_g460063_i0 PRJEB48872 475875 201 1.808642 3.63537042 Dreissena polymorpha 45954 Mollusca Mollusca 57 1.9e-7   NR XP_052261905.1 45954 g460063 i0 43.1 0.761194029850746 51 29 76.1 0 172 20 194 244 XP_052261905.1 zinc finger protein 84-like, partial [Dreissena polymorpha] diamond 153 57 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
31487419 31487419 PRJEB48872_P_NODE_542776_length_182_cov_1.146853_g526964_i0 PRJEB48872 542776 182 1.146853 2.08727246 Dreissena polymorpha 45954 Mollusca Mollusca 40 0.04   NR KAH3799778.1 45954 g526964 i0 45.9 0.60989010989011 37 13 49.5 2 64 153 9 45 KAH3799778.1 hypothetical protein DPMN_153394 [Dreissena polymorpha] diamond 111 40 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;