contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJEB48872" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21764241 | 21764241 | PRJEB48872_P_NODE_627178_length_163_cov_0.991935_g611366_i0 | PRJEB48872 | 627178 | 163 | 0.991935 | 1.61685405 | Bacteria | 2 | Bacteria | Bacteria | 87 | 3e-18 | NR | MBP2648438.1 | 2026742 | g611366 | i0 | 86.8 | 12.680981595092 | 53 | 7 | 97.5 | 0 | 3 | 161 | 436 | 488 | MBP2648438.1 hppA [Gemmatimonadota bacterium] | diamond | 2067 | 87.4 | 0.995423340961098 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28479664 | 28479664 | PRJEB48872_P_NODE_613926_length_165_cov_2.047619_g598114_i0 | PRJEB48872 | 613926 | 165 | 2.047619 | 3.37857135 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 87 | 3.13e-18 | NR | HMF88267.1 | 2026741 | g598114 | i0 | 69.8 | 7.43636363636364 | 53 | 16 | 96.4 | 0 | 6 | 164 | 250 | 302 | HMF88267.1 PAS domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 1227 | 87 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29307150 | 29307150 | PRJEB48872_P_NODE_674769_length_154_cov_1.417391_g658957_i0 | PRJEB48872 | 674769 | 154 | 1.417391 | 2.18278214 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 85.5 | 2.16e-18 | NR | MFS8637494.1 | 2026742 | g658957 | i0 | 78.4 | 12.8766233766234 | 51 | 11 | 99.4 | 0 | 153 | 1 | 78 | 128 | MFS8637494.1 alpha/beta hydrolase [Gemmatimonadota bacterium] | diamond | 1983 | 85.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29489802 | 29489802 | PRJEB48872_P_NODE_660970_length_156_cov_2.034188_g645158_i0 | PRJEB48872 | 660970 | 156 | 2.034188 | 3.17333328 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 82 | 1.52e-17 | NR | HEV2752177.1 | 2448054 | g645158 | i0 | 75.5 | 6.07692307692308 | 53 | 12 | 100 | 1 | 1 | 156 | 66 | 118 | HEV2752177.1 response regulator [Gemmatimonadales bacterium] | diamond | 948 | 82 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29591006 | 29591006 | PRJEB48872_P_NODE_692230_length_151_cov_1.214286_g676418_i0 | PRJEB48872 | 692230 | 151 | 1.214286 | 1.83357186 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 44.7 | 0.00215 | NR | HVH08349.1 | 2448054 | g676418 | i0 | 63.2 | 0.754966887417219 | 38 | 14 | 75.5 | 0 | 3 | 116 | 317 | 354 | HVH08349.1 MASE1 domain-containing protein [Gemmatimonadales bacterium] | diamond | 114 | 44.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29932261 | 29932261 | PRJEB48872_P_NODE_632011_length_162_cov_1.138211_g616199_i0 | PRJEB48872 | 632011 | 162 | 1.138211 | 1.84390182 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 89 | 1.85e-20 | NR | HEX7595213.1 | 2026741 | g616199 | i0 | 83.3 | 3.98148148148148 | 54 | 9 | 100 | 0 | 162 | 1 | 82 | 135 | HEX7595213.1 plasmid mobilization relaxosome protein MobC [Gemmatimonadaceae bacterium] | diamond | 645 | 89 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30500749 | 30500749 | PRJEB48872_P_NODE_574973_length_174_cov_1.348148_g559161_i0 | PRJEB48872 | 574973 | 174 | 1.348148 | 2.34577752 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 50.8 | 1.96e-5 | NR | HEX9248110.1 | 2026741 | g559161 | i0 | 51.1 | 3.43103448275862 | 47 | 23 | 81 | 0 | 33 | 173 | 30 | 76 | HEX9248110.1 alpha/beta hydrolase [Gemmatimonadaceae bacterium] | diamond | 597 | 51.2 | 0.9921875 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30823398 | 30823398 | PRJEB48872_P_NODE_644214_length_159_cov_2.266667_g628402_i0 | PRJEB48872 | 644214 | 159 | 2.266667 | 3.60400053 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 53.5 | 1.86e-6 | NR | MDP9178993.1 | 2026742 | g628402 | i0 | 45.1 | 0.962264150943396 | 51 | 28 | 96.2 | 0 | 156 | 4 | 75 | 125 | MDP9178993.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 153 | 53.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32025027 | 32025027 | PRJEB48872_P_NODE_642398_length_160_cov_1.140496_g626586_i0 | PRJEB48872 | 642398 | 160 | 1.140496 | 1.8247936 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 55.8 | 2.66e-7 | NR | MEO7102188.1 | 2026741 | g626586 | i0 | 53.8 | 0.975 | 52 | 21 | 97.5 | 1 | 158 | 3 | 56 | 104 | MEO7102188.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 156 | 55.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32688682 | 32688682 | PRJEB48872_P_NODE_346160_length_257_cov_6.362385_g330348_i0 | PRJEB48872 | 346160 | 257 | 6.362385 | 16.35132945 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 42.7 | 0.0421 | NR | MBI4420926.1 | 2026742 | g330348 | i0 | 37.1 | 0.723735408560311 | 62 | 39 | 72.4 | 0 | 227 | 42 | 255 | 316 | MBI4420926.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 186 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;