RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB48872" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB48872 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27311506 27311506 PRJEB48872_P_NODE_535883_length_184_cov_0.979310_g520071_i0 PRJEB48872 535883 184 0.97931 1.8019304 Fungi 4751 Fungi Fungi 98.6 1.52e-24   NR KAJ8507908.1 34470 g520071 i0 73.3 7.95652173913043 60 16 97.8 0 183 4 19 78 KAJ8507908.1 hypothetical protein ONZ45_g9753 [Pleurotus djamor] diamond 1464 98.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Pleurotus Pleurotus djamor
27823429 27823429 PRJEB48872_P_NODE_589164_length_171_cov_1.128788_g573352_i0 PRJEB48872 589164 171 1.128788 1.93022748 Gloeophyllum trabeum ATCC 11539 670483 Fungi Fungi 45.8 0.00118   NR XP_007866796.1 670483 g573352 i0 45.6 1.92982456140351 57 22 98.2 2 1 168 473 521 XP_007866796.1 uncharacterized protein GLOTRDRAFT_77041 [Gloeophyllum trabeum ATCC 11539] diamond 330 45.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Gloeophyllales Gloeophyllaceae Gloeophyllum Gloeophyllum trabeum
31139015 31139015 PRJEB48872_P_NODE_538275_length_183_cov_1.423611_g522463_i0 PRJEB48872 538275 183 1.423611 2.60520813 Puccinia triticina 1-1 BBBD Race 1 630390 Fungi Fungi 122 1.95e-33   NR OAV84643.1 630390 g522463 i0 100 0.983606557377049 60 0 98.4 0 182 3 13 72 OAV84643.1 hypothetical protein PTTG_09483, partial [Puccinia triticina 1-1 BBBD Race 1] diamond 180 122 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia triticina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;