contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJEB48872" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8643789 | 8643789 | PRJEB48872_P_NODE_413087_length_225_cov_1.301075_g397275_i0 | PRJEB48872 | 413087 | 225 | 1.301075 | 2.92741875 | Bacteria | 2 | Bacteria | Bacteria | 137 | 2.9599999999999993e-40 | NR | MFO7197006.1 | 1352 | g397275 | i0 | 93.2 | 18.7466666666667 | 74 | 5 | 98.7 | 0 | 223 | 2 | 7 | 80 | MFO7197006.1 pyridoxal 5'-phosphate synthase subunit PdxS [Enterococcus faecium] | diamond | 4218 | 138 | 0.992753623188406 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecium | ||
| 10280601 | 10280601 | PRJEB48872_P_NODE_422669_length_221_cov_1.313187_g406857_i0 | PRJEB48872 | 422669 | 221 | 1.313187 | 2.90214327 | Halanaerobium saccharolyticum | 43595 | Bacteria | Bacteria | 115 | 8.500000000000001e-30 | NR | WP_005487378.1 | 43595 | g406857 | i0 | 90.3 | 0.841628959276018 | 62 | 6 | 84.2 | 0 | 187 | 2 | 1 | 62 | WP_005487378.1 ABC transporter ATP-binding protein [Halanaerobium saccharolyticum] | diamond | 186 | 115 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiaceae | Halanaerobium | Halanaerobium saccharolyticum | ||
| 26780438 | 26780438 | PRJEB48872_P_NODE_682841_length_152_cov_2.522124_g667029_i0 | PRJEB48872 | 682841 | 152 | 2.522124 | 3.83362848 | Peptoniphilus phoceensis | 1720298 | Bacteria | Bacteria | 45.8 | 1.44e-4 | NR | WP_062552446.1 | 1720298 | g667029 | i0 | 80 | 0.493421052631579 | 25 | 5 | 49.3 | 0 | 74 | 148 | 17 | 41 | WP_062552446.1 hypothetical protein [Peptoniphilus phoceensis] | diamond | 75 | 45.8 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | Peptoniphilus phoceensis | ||
| 27886328 | 27886328 | PRJEB48872_P_NODE_490305_length_197_cov_0.930380_g474493_i0 | PRJEB48872 | 490305 | 197 | 0.93038 | 1.8328486 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 42.7 | 0.0193 | NR | MDR2569203.1 | 2485925 | g474493 | i0 | 40 | 1.52284263959391 | 50 | 26 | 76.1 | 1 | 32 | 181 | 39 | 84 | MDR2569203.1 alpha/beta hydrolase [Oscillospiraceae bacterium] | diamond | 300 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 28960142 | 28960142 | PRJEB48872_P_NODE_681248_length_153_cov_1.078947_g665436_i0 | PRJEB48872 | 681248 | 153 | 1.078947 | 1.65078891 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 43.1 | 0.0079 | NR | MTI60960.1 | 1879010 | g665436 | i0 | 51.2 | 0.843137254901961 | 43 | 19 | 82.4 | 2 | 130 | 5 | 434 | 475 | MTI60960.1 S-layer homology domain-containing protein [Bacillota bacterium] | diamond | 129 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 29370435 | 29370435 | PRJEB48872_P_NODE_446329_length_211_cov_2.383721_g430517_i0 | PRJEB48872 | 446329 | 211 | 2.383721 | 5.02965131 | Lactococcus sp. | 44273 | Bacteria | Bacteria | 107 | 5.31e-28 | NR | WP_347449991.1 | 44273 | g430517 | i0 | 64.3 | 2.98578199052133 | 70 | 25 | 99.5 | 0 | 1 | 210 | 45 | 114 | WP_347449991.1 hypothetical protein [Lactococcus sp.] | diamond | 630 | 107 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus sp. | ||
| 29875646 | 29875646 | PRJEB48872_P_NODE_665411_length_155_cov_3.017241_g649599_i0 | PRJEB48872 | 665411 | 155 | 3.017241 | 4.67672355 | Halanaerobium saccharolyticum | 43595 | Bacteria | Bacteria | 53.5 | 6.03e-7 | NR | WP_166638051.1 | 43595 | g649599 | i0 | 45.1 | 1.3741935483871 | 71 | 19 | 98.7 | 1 | 153 | 1 | 44 | 114 | WP_166638051.1 hypothetical protein [Halanaerobium saccharolyticum] | diamond | 213 | 53.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiaceae | Halanaerobium | Halanaerobium saccharolyticum | ||
| 30816702 | 30816702 | PRJEB48872_P_NODE_676334_length_154_cov_1.060870_g660522_i0 | PRJEB48872 | 676334 | 154 | 1.06087 | 1.6337398 | Bacillati | 1783272 | Bacteria | Bacteria | 68.9 | 1.45e-13 | NR | WP_259743274.1 | 1358 | g660522 | i0 | 78.9 | 7.4025974025974 | 38 | 8 | 74 | 0 | 130 | 17 | 60 | 97 | WP_259743274.1 hypothetical protein [Lactococcus lactis] | diamond | 1140 | 68.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 31740082 | 31740082 | PRJEB48872_P_NODE_683517_length_152_cov_2.017699_g667705_i0 | PRJEB48872 | 683517 | 152 | 2.017699 | 3.06690248 | Bacillus halotolerans | 260554 | Bacteria | Bacteria | 104 | 5.1800000000000005e-27 | NR | WP_202854023.1 | 260554 | g667705 | i0 | 98 | 1.97368421052632 | 50 | 1 | 98.7 | 0 | 1 | 150 | 43 | 92 | WP_202854023.1 hypothetical protein, partial [Bacillus halotolerans] | diamond | 300 | 104 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus halotolerans | ||
| 32341599 | 32341599 | PRJEB48872_P_NODE_696359_length_150_cov_1.477477_g680547_i0 | PRJEB48872 | 696359 | 150 | 1.477477 | 2.2162155 | Staphylococcus | 1279 | Bacteria | Bacteria | 80.1 | 1.19e-17 | NR | WP_085061065.1 | 1279 | g680547 | i0 | 92.5 | 0.8 | 40 | 3 | 80 | 0 | 120 | 1 | 1 | 40 | WP_085061065.1 MULTISPECIES: hypothetical protein [Staphylococcus] | diamond | 120 | 80.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | |||
| 32594491 | 32594491 | PRJEB48872_P_NODE_304240_length_284_cov_2.334694_g288428_i0 | PRJEB48872 | 304240 | 284 | 2.334694 | 6.63053096 | Enterococcus faecium | 1352 | Bacteria | Bacteria | 41.2 | 0.0405 | NR | WP_416076096.1 | 1352 | g288428 | i0 | 44.7 | 0.401408450704225 | 38 | 21 | 40.1 | 0 | 82 | 195 | 38 | 75 | WP_416076096.1 RBD-like domain-containing protein [Enterococcus faecium] | diamond | 114 | 41.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecium | ||
| 32681877 | 32681877 | PRJEB48872_P_NODE_327340_length_269_cov_1.595652_g311528_i0 | PRJEB48872 | 327340 | 269 | 1.595652 | 4.29230388 | root | 1 | Root_unresolved | Root_unresolved | 83.6 | 1.24e-16 | NR | ACV20892.1 | 1396 | g311528 | i0 | 65.9 | 3.65799256505576 | 82 | 28 | 91.4 | 0 | 8 | 253 | 156 | 237 | ACV20892.1 enhanced green fluorescent protein [Bacillus cereus] | diamond | 984 | 83.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;