RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB48218" and tax_phylum = "Candidatus Staskawicziibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Staskawicziibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB48218 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26716555 26716555 PRJEB48218_S_NODE_29221_length_155_cov_2.777778_g28259_i0 PRJEB48218 29221 155 2.777778 4.3055559 Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_ 2053617 Bacteria Bacteria 65.5 1.06e-10   NR OGZ68419.1 1802207 g28259 i0 75.6 1.64516129032258 41 10 79.4 0 133 11 451 491 OGZ68419.1 MAG: hypothetical protein A3D44_00560 [Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22] diamond 255 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22
26812022 26812022 PRJEB48218_S_NODE_21121_length_200_cov_3.380117_g20159_i0 PRJEB48218 21121 200 3.380117 6.760234 Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_ 2053617 Bacteria Bacteria 70.9 2.76e-13   NR OGZ68993.1 1802207 g20159 i0 58.3 0.72 48 20 72 0 55 198 1 48 OGZ68993.1 MAG: hypothetical protein A3D44_00310 [Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22] diamond 144 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;