RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB48218" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB48218 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29528307 29528307 PRJEB48218_S_NODE_30430_length_151_cov_2.106557_g29468_i0 PRJEB48218 30430 151 2.106557 3.18090107 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 55.5 1.7e-7   NR HEU4344002.1 2838779 g29468 i0 68.8 0.635761589403974 32 10 63.6 0 148 53 66 97 HEU4344002.1 hypothetical protein [Candidatus Binatia bacterium] diamond 96 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30096572 30096572 PRJEB48218_S_NODE_29032_length_156_cov_2.110236_g28070_i0 PRJEB48218 29032 156 2.110236 3.29196816 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.5 2.21e-8   NR HEY3304589.1 2838779 g28070 i0 78.1 0.615384615384615 32 7 61.5 0 154 59 116 147 HEY3304589.1 substrate-binding domain-containing protein [Candidatus Binatia bacterium] diamond 96 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32468197 32468197 PRJEB48218_S_NODE_22879_length_187_cov_3.651899_g21917_i0 PRJEB48218 22879 187 3.651899 6.82905113 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 100 6.96e-24   NR HUC87987.1 2838779 g21917 i0 86.2 0.93048128342246 58 8 93 0 13 186 93 150 HUC87987.1 ATP-binding cassette domain-containing protein [Candidatus Binatia bacterium] diamond 174 100 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;